RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 WDSUB1Q8N9V3 476 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 LRRC75AQ8NAA5 344 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 OR51A7Q8NH64 312 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 FAR1Q8WVX9 515 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ZNF524Q96C55 264 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 NXPE2Q96DL1 559 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 TMEM80Q96HE8 168 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 DOK1Q99704 481 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 PTDSS2Q9BVG9 487 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CCDC90BQ9GZT6 254 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 MRPL39Q9NYK5 338 aaKnown RBP11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 DNAJC27Q9NZQ0 273 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 H2AFY2Q9P0M6 372 aaPredicted RBP11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CDV3Q9UKY7 258 aaKnown RBP11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 RIF1Q5UIP0 2472 aaKnown RBP11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CNOT1A5YKK6 2376 aaKnown RBP11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 FTCDNL1E5RQL4 147 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 PRR23D1E9PI22 279 aaPredicted RBP11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 M0R129 80 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 TRIM3O75382 744 aaPredicted RBP11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CBR3O75828 277 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 RAB36O95755 333 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 FADS2O95864 444 aaKnown RBP11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 PRR23D2P0DMB1 279 aaPredicted RBP11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CCL3P10147 92 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 SDHAP31040 664 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CAPZA2P47755 286 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 MASP1P48740 699 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ST13P50502 369 aaKnown RBP11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 TMBIM6P55061 237 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CDH11P55287 796 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 NHLH1Q02575 133 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 FOXF1Q12946 379 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CAMK2BQ13554 666 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 NEDD8Q15843 81 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ZNF239Q16600 458 aaKnown RBP11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 SLC35D3Q5M8T2 416 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ABHD17BQ5VST6 288 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 FOXB2Q5VYV0 432 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 TIGD3Q6B0B8 471 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 NIPAL3Q6P499 406 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 FAM122BQ7Z309 247 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 MEX3DQ86XN8 651 aaKnown RBP11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 OR5J2Q8NH18 312 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 TAAR8Q969N4 342 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 KTI12Q96EK9 354 aaPredicted RBP11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 THOC3Q96J01 351 aaKnown RBP11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 MOGAT1Q96PD6 335 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 KLHDC3Q9BQ90 382 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ASPNQ9BXN1 380 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 PROK2Q9HC23 129 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 TIMMDC1Q9NPL8 285 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 HINT3Q9NQE9 182 aaKnown RBP11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 INPP5EQ9NRR6 644 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 DLL3Q9NYJ7 618 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 GPR83Q9NYM4 423 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 MED11Q9P086 117 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 AASSQ9UDR5 926 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 RSL24D1Q9UHA3 163 aaKnown RBP11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 IL17BQ9UHF5 180 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 EXOGQ9Y2C4 368 aaKnown RBP11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 EXOSC1Q9Y3B2 195 aaKnown RBP11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CEPT1Q9Y6K0 416 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 FREM3P0C091 2139 aa11.12□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 GVINP1Q7Z2Y8 2422 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 MED13Q9UHV7 2174 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 NCKAP5O14513 1909 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 TMEM129A0AVI4 362 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 TRIM64BA6NI03 449 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 B4DXG7 233 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 MCIDASD6RGH6 385 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 LINC01387J3KSC0 135 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 GNB5O14775 395 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 SEC14L5O43304 696 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 TRMUO75648 421 aaKnown RBP11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 PPP1R3DO95685 299 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 SLC2A5P22732 501 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 NOS3P29474 1203 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 SRD5A2P31213 254 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 RPL4P36578 427 aaKnown RBP11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CENPAP49450 140 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 SLC25A1P53007 311 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 NUDT6P53370 316 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 LTBQ06643 244 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 GGTLC2Q14390 218 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ALG10Q5BKT4 473 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ZNF362Q5T0B9 420 aaPredicted RBP11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 LCN1P1Q5VSP4 162 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 FAM205BPQ63HN1 556 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 BICRALQ6AI39 1079 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CCDC81Q6ZN84 652 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 MEPCEQ7L2J0 689 aaKnown RBP11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ADCK1Q86TW2 530 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 EGFL6Q8IUX8 553 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 PSD4Q8NDX1 1056 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 PROKR2Q8NFJ6 384 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 OR1J4Q8NGS1 313 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 RAB2BQ8WUD1 216 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 SGCDQ92629 289 aa11.11□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ERMAPQ96PL5 475 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms