RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 YES1P07947 543 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 ITGA2P17301 1181 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 BMP5P22003 454 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 SLC16A1P53985 500 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 RASGEF1BQ0VAM2 473 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 CDSNQ15517 529 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 OR7A5Q15622 319 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 FBXL19-AS1Q494R0 122 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 ABLIM2Q6H8Q1 611 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 PPP4R4Q6NUP7 873 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 TTC33Q6PID6 262 aaPredicted RBP12.38□□□□□ -0.43
RNF40-212ENST00000602784 WDR88Q6ZMY6 472 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 TSEN54Q7Z6J9 526 aaKnown RBP12.38□□□□□ -0.43
RNF40-212ENST00000602784 CYP4Z1Q86W10 505 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 OFCC1Q8IZS5 231 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 FAM86B1Q8N7N1 296 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 ABHD3Q8WU67 409 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 TAAR8Q969N4 342 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 STARD4Q96DR4 205 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 KTI12Q96EK9 354 aaPredicted RBP12.38□□□□□ -0.43
RNF40-212ENST00000602784 CLPTM1LQ96KA5 538 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 CADM1Q9BY67 442 aaKnown RBP12.38□□□□□ -0.43
RNF40-212ENST00000602784 LRMDAQ9H2I8 198 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 NDUFAF4Q9P032 175 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 JKAMPQ9P055 326 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 KLHL13Q9P2N7 655 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 ING1Q9UK53 422 aaPredicted RBP12.38□□□□□ -0.43
RNF40-212ENST00000602784 EMC9Q9Y3B6 208 aa12.38□□□□□ -0.43
RNF40-212ENST00000602784 UTP20O75691 2785 aaKnown RBP12.37□□□□□ -0.43
RNF40-212ENST00000602784 IGHV3-15A0A0B4J1V0 119 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 AQP7P3A6NL99 342 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 MSTNO14793 375 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 FFAR1O14842 300 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 PRSS23O95084 383 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 VAMP5O95183 116 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 STAMBPO95630 424 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 MT-ATP6P00846 226 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 RHCEP18577 417 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 ATP6V1B2P21281 511 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 RPS5P46782 204 aaKnown RBP12.37□□□□□ -0.43
RNF40-212ENST00000602784 PCYT1AP49585 367 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 CTBP2P56545 445 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 CYP2R1Q6VVX0 501 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 CCDC121Q6ZUS5 278 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 MAMDC2Q7Z304 686 aaPredicted RBP12.37□□□□□ -0.43
RNF40-212ENST00000602784 CNEP1R1Q8N9A8 125 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 RELL2Q8NC24 303 aaPredicted RBP12.37□□□□□ -0.43
RNF40-212ENST00000602784 OR6K3Q8NGY3 331 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 MCUR1Q96AQ8 359 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 ZNF300Q96RE9 604 aaPredicted RBP12.37□□□□□ -0.43
RNF40-212ENST00000602784 PSD2Q9BQI7 771 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 FNDC11Q9BVV2 318 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 SF3B5Q9BWJ5 86 aaKnown RBP12.37□□□□□ -0.43
RNF40-212ENST00000602784 TRIM15Q9C019 465 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 KLHL4Q9C0H6 718 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 ANKRD19PQ9H560 264 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 IL1RAPQ9NPH3 570 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 PLSCR4Q9NRQ2 329 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 EMC3Q9P0I2 261 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 B3GALT5Q9Y2C3 310 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 FAM32AQ9Y421 112 aaKnown RBP12.37□□□□□ -0.43
RNF40-212ENST00000602784 CORINQ9Y5Q5 1042 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 CACNA1CQ13936 2221 aa12.37□□□□□ -0.43
RNF40-212ENST00000602784 ICE1Q9Y2F5 2266 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 LOC102725191A0A1B0GVB3 256 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 TCRBV5S2A0A599 114 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 ZNF716A6NP11 495 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 ZNF814B7Z6K7 855 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 GPR171O14626 319 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 CLDN1O95832 211 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 CGAP01215 116 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 BGLAPP02818 100 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 CD8BP10966 210 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 HOXB6P17509 224 aaKnown RBP12.36□□□□□ -0.43
RNF40-212ENST00000602784 KLK2P20151 261 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 AGTR1P30556 359 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 ASCL1P50553 236 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 VLDLRP98155 873 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 TFF3Q07654 80 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 TRAM2Q15035 370 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 IQCCQ4KMZ1 466 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 TMEM201Q5SNT2 666 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 OTUD3Q5T2D3 398 aaPredicted RBP12.36□□□□□ -0.43
RNF40-212ENST00000602784 PIWIL3Q7Z3Z3 882 aaKnown RBP12.36□□□□□ -0.43
RNF40-212ENST00000602784 BTLAQ7Z6A9 289 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 P3H2Q8IVL5 708 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 CCDC103Q8IW40 242 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 TMEM99Q8N816 258 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 SCAIQ8N9R8 606 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 ADPRHL1Q8NDY3 354 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 PIK3C3Q8NEB9 887 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 CCDC124Q96CT7 223 aaKnown RBP12.36□□□□□ -0.43
RNF40-212ENST00000602784 DNAJA3Q96EY1 480 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 LRRC46Q96FV0 321 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 LRGUKQ96M69 825 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 UCK2Q9BZX2 261 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 MAGIXQ9H6Y5 334 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 NMNAT1Q9HAN9 279 aaPredicted RBP12.36□□□□□ -0.43
RNF40-212ENST00000602784 CHST11Q9NPF2 352 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 MAN2C1Q9NTJ4 1040 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms