RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 E7EQL1 145 aa18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 CLIC1O00299 241 aa18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 NR5A2O00482 541 aa18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 SSX4O60224 188 aa18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 EIF1BO60739 113 aaKnown RBP18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 HNRNPCL1O60812 293 aaKnown RBP18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 HNRNPCL4P0DMR1 293 aa18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 TTKP33981 857 aa18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 ACAA2P42765 397 aaKnown RBP18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 FADDQ13158 208 aa18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 LARS2Q15031 903 aaKnown RBP18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 GABRA6Q16445 453 aa18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 OR7E24Q6IFN5 339 aa18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 CASP12Q6UXS9 341 aa18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 FUNDC1Q8IVP5 155 aa18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 CLIP4Q8N3C7 705 aa18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 CADM2Q8N3J6 435 aa18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 MAL2Q969L2 176 aa18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 MUS81Q96NY9 551 aa18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 NAA11Q9BSU3 229 aaPredicted RBP18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 A4GALTQ9NPC4 353 aa18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 CCDC167Q9P0B6 97 aa18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 CHST2Q9Y4C5 530 aa18.63■□□□□ 0.57
PPFIA3-209ENST00000602783 CHD3Q12873 2000 aaKnown RBP18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 M0R1B8 84 aa18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 ITGA5P08648 1049 aa18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 PRG2P13727 222 aa18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 CXCR1P25024 350 aa18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 CD40P25942 277 aa18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 MAP2K6P52564 334 aa18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 SPOCK1Q08629 439 aa18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 NRF1Q16656 503 aa18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 C9orf135Q5VTT2 229 aa18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 WBP2NLQ6ICG8 309 aa18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 BLOC1S3Q6QNY0 202 aa18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 MSRB3Q8IXL7 192 aa18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 SPDL1Q96EA4 605 aa18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 ADAD1Q96M93 576 aaKnown RBP18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 DHRS9Q9BPW9 319 aa18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 SPATA9Q9BWV2 254 aa18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 PARPBPQ9NWS1 579 aa18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 SLC25A37Q9NYZ2 338 aa18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 UPB1Q9UBR1 384 aa18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 FLVCR1Q9Y5Y0 555 aa18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 HEATR1Q9H583 2144 aaKnown RBP18.62■□□□□ 0.57
PPFIA3-209ENST00000602783 BMP2P12643 396 aa18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 NCF2P19878 526 aaPredicted RBP18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 COPZ1P61923 177 aa18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 IRX1P78414 480 aaPredicted RBP18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 ZSWIM7Q19AV6 140 aa18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 ZNF311Q5JNZ3 666 aa18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 LRIF1Q5T3J3 769 aa18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 PAQR6Q6TCH4 344 aa18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 SERPINA11Q86U17 422 aa18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 FBXL14Q8N1E6 418 aa18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 DEPDC4Q8N2C3 294 aa18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 BBS10Q8TAM1 723 aa18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 RHNO1Q9BSD3 238 aa18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 CACNG6Q9BXT2 260 aa18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 BCL2L10Q9HD36 194 aa18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 YAE1D1Q9NRH1 226 aa18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 CBLN4Q9NTU7 201 aa18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 INTS9Q9NV88 658 aaKnown RBP18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 SLAMF8Q9P0V8 285 aa18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 ZNF232Q9UNY5 417 aa18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 SLC9A8Q9Y2E8 581 aa18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 IFT52Q9Y366 437 aa18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 ATRQ13535 2644 aa18.61■□□□□ 0.57
PPFIA3-209ENST00000602783 HMGB1P1B2RPK0 211 aaPredicted RBP18.6■□□□□ 0.57
PPFIA3-209ENST00000602783 C5orf58C9J3I9 102 aa18.6■□□□□ 0.57
PPFIA3-209ENST00000602783 PDLIM1O00151 329 aa18.6■□□□□ 0.57
PPFIA3-209ENST00000602783 FRS3O43559 492 aa18.6■□□□□ 0.57
PPFIA3-209ENST00000602783 CD5LO43866 347 aa18.6■□□□□ 0.57
PPFIA3-209ENST00000602783 FABP6P51161 128 aa18.6■□□□□ 0.57
PPFIA3-209ENST00000602783 NUDT6P53370 316 aa18.6■□□□□ 0.57
PPFIA3-209ENST00000602783 BNIP2Q12982 314 aa18.6■□□□□ 0.57
PPFIA3-209ENST00000602783 CEACAM7Q14002 265 aa18.6■□□□□ 0.57
PPFIA3-209ENST00000602783 SLC17A1Q14916 467 aa18.6■□□□□ 0.57
PPFIA3-209ENST00000602783 OR7A5Q15622 319 aa18.6■□□□□ 0.57
PPFIA3-209ENST00000602783 PAGE3Q5JUK9 113 aa18.6■□□□□ 0.57
PPFIA3-209ENST00000602783 PRAMEF8Q5VWM4 474 aa18.6■□□□□ 0.57
PPFIA3-209ENST00000602783 PRAMEF7Q5VXH5 474 aa18.6■□□□□ 0.57
PPFIA3-209ENST00000602783 MUC15Q8N387 334 aa18.6■□□□□ 0.57
PPFIA3-209ENST00000602783 WDR31Q8NA23 367 aa18.6■□□□□ 0.57
PPFIA3-209ENST00000602783 ARMC7Q9H6L4 198 aa18.6■□□□□ 0.57
PPFIA3-209ENST00000602783 SLC7A10Q9NS82 523 aa18.6■□□□□ 0.57
PPFIA3-209ENST00000602783 COL6A5A8TX70 2615 aa18.6■□□□□ 0.57
PPFIA3-209ENST00000602783 LIPT2A6NK58 231 aa18.59■□□□□ 0.57
PPFIA3-209ENST00000602783 TLX2O43763 284 aaPredicted RBP18.59■□□□□ 0.57
PPFIA3-209ENST00000602783 GPIP06744 558 aa18.59■□□□□ 0.57
PPFIA3-209ENST00000602783 ATP4BP51164 291 aa18.59■□□□□ 0.57
PPFIA3-209ENST00000602783 SQLEQ14534 574 aa18.59■□□□□ 0.57
PPFIA3-209ENST00000602783 AGKQ53H12 422 aa18.59■□□□□ 0.57
PPFIA3-209ENST00000602783 OTUD3Q5T2D3 398 aaPredicted RBP18.59■□□□□ 0.57
PPFIA3-209ENST00000602783 TSPO2Q5TGU0 170 aa18.59■□□□□ 0.57
PPFIA3-209ENST00000602783 C11orf71Q6IPW1 123 aa18.59■□□□□ 0.57
PPFIA3-209ENST00000602783 B3GLCTQ6Y288 498 aa18.59■□□□□ 0.57
PPFIA3-209ENST00000602783 HDXQ7Z353 690 aa18.59■□□□□ 0.57
PPFIA3-209ENST00000602783 C10orf111Q8N326 155 aa18.59■□□□□ 0.57
PPFIA3-209ENST00000602783 NFKBIDQ8NI38 313 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms