RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 SFTPCP11686 197 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 SMSP52788 366 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 TPD52P55327 224 aaPredicted RBP16.73■□□□□ 0.27
SSBP4-212ENST00000601919 CSNK2A1P68400 391 aaPredicted RBP16.73■□□□□ 0.27
SSBP4-212ENST00000601919 SLC35A1P78382 337 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 ADARB1P78563 741 aaKnown RBP16.73■□□□□ 0.27
SSBP4-212ENST00000601919 FOXK2Q01167 660 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 PMP22Q01453 160 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 KEAP1Q14145 624 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 C1QL3Q5VWW1 255 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 SLC6A19Q695T7 634 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 SLC27A4Q6P1M0 643 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 SETD9Q8NE22 299 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 OR5J2Q8NH18 312 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 OR51A7Q8NH64 312 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 SMPDL3BQ92485 455 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 ARL5BQ96KC2 179 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 HRASLS5Q96KN8 279 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 MOGAT1Q96PD6 335 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 APOL4Q9BPW4 351 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 PRRG3Q9BZD7 231 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 OR52D1Q9H346 318 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 ALKBH4Q9NXW9 302 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 MRPL39Q9NYK5 338 aaKnown RBP16.73■□□□□ 0.27
SSBP4-212ENST00000601919 ZMIZ1Q9ULJ6 1067 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 GMPPBQ9Y5P6 360 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 FRYQ5TBA9 3013 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 ASPMQ8IZT6 3477 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 TRAV27A0A087WT01 109 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 LIPT2A6NK58 231 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 SULT2B1O00204 365 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 DENRO43583 198 aaKnown RBP16.72■□□□□ 0.27
SSBP4-212ENST00000601919 PTP4A3O75365 173 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 NDUFB2O95178 105 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 OR6A2O95222 327 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 CELA3AP09093 270 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 GRPRP30550 384 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 SLC6A6P31641 620 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 OR2B6P58173 313 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 LTBQ06643 244 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 PTGES3Q15185 160 aaKnown RBP16.72■□□□□ 0.27
SSBP4-212ENST00000601919 OR7A5Q15622 319 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 BCL2A1Q16548 175 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 PLEKHN1Q494U1 663 aaPredicted RBP16.72■□□□□ 0.27
SSBP4-212ENST00000601919 TMPPEQ6ZT21 453 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 ESPNLQ6ZVH7 1005 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 KIF18BQ86Y91 864 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 LRRC17Q8N6Y2 441 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 NEIL3Q8TAT5 605 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 ABTB1Q969K4 478 aaPredicted RBP16.72■□□□□ 0.27
SSBP4-212ENST00000601919 MIB2Q96AX9 1013 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 ZHX1-C8orf76Q96EF9 292 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 ZNF570Q96NI8 536 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 TNFRSF13CQ96RJ3 184 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 DEFB127Q9H1M4 99 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 SLC6A15Q9H2J7 730 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 EGLN3Q9H6Z9 239 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 TIGARQ9NQ88 270 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 ZNF71Q9NQZ8 489 aaPredicted RBP16.72■□□□□ 0.27
SSBP4-212ENST00000601919 BAIAP2Q9UQB8 552 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 B3GALT5Q9Y2C3 310 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 HIF3AQ9Y2N7 669 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 SLC6A5Q9Y345 797 aa16.72■□□□□ 0.27
SSBP4-212ENST00000601919 ZAR1LA6NP61 321 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 FTCDNL1E5RQL4 147 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 LRRN3E7EW58 273 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 BLOC1S5-TXNDC5H3BN57 136 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 DNPH1O43598 174 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 EIF1BO60739 113 aaKnown RBP16.71■□□□□ 0.27
SSBP4-212ENST00000601919 TP53P04637 393 aaPredicted RBP16.71■□□□□ 0.27
SSBP4-212ENST00000601919 IMPDH2P12268 514 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 POLR2IP36954 125 aaKnown RBP16.71■□□□□ 0.27
SSBP4-212ENST00000601919 GIPRP48546 466 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 DIO1P49895 249 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 CDC42P60953 191 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 RPS4XP62701 263 aaKnown RBP16.71■□□□□ 0.27
SSBP4-212ENST00000601919 PMS2P3Q13401 168 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 SGCBQ16585 318 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 RNFT1Q5M7Z0 435 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 H1FNTQ75WM6 255 aaPredicted RBP16.71■□□□□ 0.27
SSBP4-212ENST00000601919 DEPDC4Q8N2C3 294 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 MEIOBQ8N635 442 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 OR2T33Q8NG76 320 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 SAMD8Q96LT4 415 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 PITX2Q99697 317 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 TSSK6Q9BXA6 273 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 ANKRD60Q9BZ19 345 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 MCCC2Q9HCC0 563 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 NDRG4Q9ULP0 352 aaKnown RBP16.71■□□□□ 0.27
SSBP4-212ENST00000601919 LHX6Q9UPM6 363 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 DMXL2Q8TDJ6 3036 aa16.71■□□□□ 0.27
SSBP4-212ENST00000601919 A0A1W2PNR3 127 aa16.7■□□□□ 0.26
SSBP4-212ENST00000601919 FZD7O75084 574 aa16.7■□□□□ 0.26
SSBP4-212ENST00000601919 IGHG3P01860 377 aa16.7■□□□□ 0.26
SSBP4-212ENST00000601919 OPN1LWP04000 364 aa16.7■□□□□ 0.26
SSBP4-212ENST00000601919 HMGN1P05114 100 aa16.7■□□□□ 0.26
SSBP4-212ENST00000601919 SHC1P29353 583 aa16.7■□□□□ 0.26
SSBP4-212ENST00000601919 GGT2P36268 569 aa16.7■□□□□ 0.26
SSBP4-212ENST00000601919 RPL4P36578 427 aaKnown RBP16.7■□□□□ 0.26
SSBP4-212ENST00000601919 CDK5Q00535 292 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms