RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 FUOMA2VDF0 154 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 CLDN24A6NM45 220 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 EIF1AYO14602 144 aaKnown RBP10.87□□□□□ -0.67
ZNF548-209ENST00000598895 ZNF264O43296 627 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 BCAS1O75363 584 aaPredicted RBP10.87□□□□□ -0.67
ZNF548-209ENST00000598895 SERPINA1P01009 418 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 CSTAP01040 98 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 IL2RAP01589 272 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 BCHEP06276 602 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 NUDT7P0C024 238 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 IL11P20809 199 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 CD247P20963 164 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 BMP5P22003 454 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 MAGEA8P43361 318 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 CLDN15P56746 228 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 DSTNP60981 165 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 IL5RAQ01344 420 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 SF3B4Q15427 424 aaKnown RBP eCLIP10.87□□□□□ -0.67
ZNF548-209ENST00000598895 TRIM16LQ309B1 348 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 RPS26P11Q5JNZ5 115 aaPredicted RBP10.87□□□□□ -0.67
ZNF548-209ENST00000598895 CHMP1BQ7LBR1 199 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 SERPINA11Q86U17 422 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 MSRB3Q8IXL7 192 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 GCNT2Q8N0V5 402 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 ATP6V1C2Q8NEY4 427 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 LILRB4Q8NHJ6 448 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 ZPLD1Q8TCW7 415 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 ZNF524Q96C55 264 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 ZNF845Q96IR2 970 aaPredicted RBP10.87□□□□□ -0.67
ZNF548-209ENST00000598895 PINK1Q9BXM7 581 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 KCNJ16Q9NPI9 418 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 SLC25A37Q9NYZ2 338 aa10.87□□□□□ -0.67
ZNF548-209ENST00000598895 DOPEY1Q5JWR5 2465 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 USP9YO00507 2555 aaPredicted RBP10.86□□□□□ -0.67
ZNF548-209ENST00000598895 A0A087WZY1 265 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 MBD3L4A6NDZ8 208 aaPredicted RBP10.86□□□□□ -0.67
ZNF548-209ENST00000598895 MBD3L3A6NE82 208 aaPredicted RBP10.86□□□□□ -0.67
ZNF548-209ENST00000598895 MBD3L5A6NJ08 208 aaPredicted RBP10.86□□□□□ -0.67
ZNF548-209ENST00000598895 CD8B2A6NJW9 211 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 HSPB2A8KAH6 182 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 M0R3G1 203 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 CLIC1O00299 241 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 TGM6O95932 706 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 HOXB9P17482 250 aaPredicted RBP10.86□□□□□ -0.67
ZNF548-209ENST00000598895 FPR1P21462 350 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 PPIBP23284 216 aaKnown RBP10.86□□□□□ -0.67
ZNF548-209ENST00000598895 DNAJA1P31689 397 aaKnown RBP10.86□□□□□ -0.67
ZNF548-209ENST00000598895 CEACAM8P31997 349 aaPredicted RBP10.86□□□□□ -0.67
ZNF548-209ENST00000598895 GZMMP51124 257 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 PSMD7P51665 324 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 ZNF136P52737 540 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 FOXF2Q12947 444 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 CBX3Q13185 183 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 SKP2Q13309 424 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 CDK5R2Q13319 367 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 FGFBP1Q14512 234 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 MAPK11Q15759 364 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 HSPB2Q16082 182 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 SGCBQ16585 318 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 TMEM44Q2T9K0 475 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 GLYR1Q49A26 553 aaPredicted RBP10.86□□□□□ -0.67
ZNF548-209ENST00000598895 OR2T5Q6IEZ7 315 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 POMZP3Q6PJE2 187 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 P4HA3Q7Z4N8 544 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 GRAMD2AQ8IUY3 354 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 ZDHHC21Q8IVQ6 265 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 RELL2Q8NC24 303 aaPredicted RBP10.86□□□□□ -0.67
ZNF548-209ENST00000598895 TOR1AIP2Q8NFQ8 470 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 OR2T29Q8NH02 315 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 MBD3L2Q8NHZ7 208 aaPredicted RBP10.86□□□□□ -0.67
ZNF548-209ENST00000598895 GPR119Q8TDV5 335 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 FCGR1BQ92637 280 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 ZBTB8AQ96BR9 441 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 INTS12Q96CB8 462 aaKnown RBP10.86□□□□□ -0.67
ZNF548-209ENST00000598895 TRNT1Q96Q11 434 aaKnown RBP10.86□□□□□ -0.67
ZNF548-209ENST00000598895 CCDC90BQ9GZT6 254 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 SAP130Q9H0E3 1048 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 SLC38A1Q9H2H9 487 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 CALHM2Q9HA72 323 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 HHATLQ9HCP6 504 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 POLE3Q9NRF9 147 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 P2RX2Q9UBL9 471 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 CORO2BQ9UQ03 480 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 LIPT1Q9Y234 373 aa10.86□□□□□ -0.67
ZNF548-209ENST00000598895 HCFC1P51610 2035 aa10.85□□□□□ -0.67
ZNF548-209ENST00000598895 EIF4E2O60573 245 aaKnown RBP10.85□□□□□ -0.67
ZNF548-209ENST00000598895 FABP3P05413 133 aa10.85□□□□□ -0.67
ZNF548-209ENST00000598895 TMIGD3P0DMS9 266 aaPredicted RBP10.85□□□□□ -0.67
ZNF548-209ENST00000598895 COX6B1P14854 86 aa10.85□□□□□ -0.67
ZNF548-209ENST00000598895 ZNF17P17021 662 aa10.85□□□□□ -0.67
ZNF548-209ENST00000598895 PRKCAP17252 672 aa10.85□□□□□ -0.67
ZNF548-209ENST00000598895 PCMT1P22061 227 aa10.85□□□□□ -0.67
ZNF548-209ENST00000598895 SHC1P29353 583 aa10.85□□□□□ -0.67
ZNF548-209ENST00000598895 SFTPDP35247 375 aa10.85□□□□□ -0.67
ZNF548-209ENST00000598895 TIMP3P35625 211 aa10.85□□□□□ -0.67
ZNF548-209ENST00000598895 EIF1AXP47813 144 aaKnown RBP10.85□□□□□ -0.67
ZNF548-209ENST00000598895 SNTB1Q13884 538 aaKnown RBP10.85□□□□□ -0.67
ZNF548-209ENST00000598895 CBFBQ13951 182 aa10.85□□□□□ -0.67
ZNF548-209ENST00000598895 QPRTQ15274 297 aa10.85□□□□□ -0.67
ZNF548-209ENST00000598895 RGNQ15493 299 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms