RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 NPAP1Q9NZP6 1156 aa13.27□□□□□ -0.29
LIG1-215ENST00000597901 UPB1Q9UBR1 384 aa13.27□□□□□ -0.29
LIG1-215ENST00000597901 MALT1Q9UDY8 824 aa13.27□□□□□ -0.29
LIG1-215ENST00000597901 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.27□□□□□ -0.29
LIG1-215ENST00000597901 DCTN4Q9UJW0 460 aa13.27□□□□□ -0.29
LIG1-215ENST00000597901 TPST1O60507 370 aa13.26□□□□□ -0.29
LIG1-215ENST00000597901 SASH3O75995 380 aa13.26□□□□□ -0.29
LIG1-215ENST00000597901 DANCRP0C864 163 aa13.26□□□□□ -0.29
LIG1-215ENST00000597901 MTORP42345 2549 aa13.26□□□□□ -0.29
LIG1-215ENST00000597901 P2RY4P51582 365 aa13.26□□□□□ -0.29
LIG1-215ENST00000597901 ADRM1Q16186 407 aa13.26□□□□□ -0.29
LIG1-215ENST00000597901 AAED1Q7RTV5 226 aa13.26□□□□□ -0.29
LIG1-215ENST00000597901 KRT73Q86Y46 540 aa13.26□□□□□ -0.29
LIG1-215ENST00000597901 CIARTQ8N365 385 aaPredicted RBP13.26□□□□□ -0.29
LIG1-215ENST00000597901 OR52N5Q8NH56 324 aa13.26□□□□□ -0.29
LIG1-215ENST00000597901 MFSD8Q8NHS3 518 aa13.26□□□□□ -0.29
LIG1-215ENST00000597901 FBXW5Q969U6 566 aa13.26□□□□□ -0.29
LIG1-215ENST00000597901 TMEM45BQ96B21 275 aa13.26□□□□□ -0.29
LIG1-215ENST00000597901 ZNF385AQ96PM9 386 aaKnown RBP13.26□□□□□ -0.29
LIG1-215ENST00000597901 BDH2Q9BUT1 245 aa13.26□□□□□ -0.29
LIG1-215ENST00000597901 SPATA5L1Q9BVQ7 753 aa13.26□□□□□ -0.29
LIG1-215ENST00000597901 PRR14Q9BWN1 585 aa13.26□□□□□ -0.29
LIG1-215ENST00000597901 TRIM2Q9C040 744 aa13.26□□□□□ -0.29
LIG1-215ENST00000597901 TMEM38AQ9H6F2 299 aa13.26□□□□□ -0.29
LIG1-215ENST00000597901 CISD1Q9NZ45 108 aaKnown RBP13.26□□□□□ -0.29
LIG1-215ENST00000597901 NDUFAF1Q9Y375 327 aa13.26□□□□□ -0.29
LIG1-215ENST00000597901 SLC25A15Q9Y619 301 aa13.26□□□□□ -0.29
LIG1-215ENST00000597901 A0A1W2PR80 420 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 TMEM229AB2RXF0 380 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 SHISA9B4DS77 424 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 OVOL3O00110 214 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 EDF1O60869 148 aaKnown RBP13.25□□□□□ -0.29
LIG1-215ENST00000597901 VAMP5O95183 116 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 SOD3P08294 240 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 ITGA5P08648 1049 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 SLC6A2P23975 617 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 ATP5J2P56134 94 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 RPS4XP62701 263 aaKnown RBP13.25□□□□□ -0.29
LIG1-215ENST00000597901 EGR4Q05215 589 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 SCARB2Q14108 478 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 GLIPR1L2Q4G1C9 344 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 C9orf135Q5VTT2 229 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 DHRS4L2Q6PKH6 230 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 CREB3L2Q70SY1 520 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 GPAT4Q86UL3 456 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 COMTD1Q86VU5 262 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 LSMEM1Q8N8F7 131 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 WDR31Q8NA23 367 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 KBTBD8Q8NFY9 601 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 SLC25A36Q96CQ1 311 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 C1QTNF6Q9BXI9 259 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 ZNF385DQ9H6B1 395 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 NPHS2Q9NP85 383 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 RPS6KB2Q9UBS0 482 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 LEF1Q9UJU2 399 aaPredicted RBP13.25□□□□□ -0.29
LIG1-215ENST00000597901 TRIM33Q9UPN9 1127 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 CORO2BQ9UQ03 480 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 FREM1Q5H8C1 2179 aa13.25□□□□□ -0.29
LIG1-215ENST00000597901 ZNF469Q96JG9 3925 aaPredicted RBP13.25□□□□□ -0.29
LIG1-215ENST00000597901 ACANP16112 2415 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 TRIM64A6NGJ6 449 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 TRIM64BA6NI03 449 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 ELOA3DA6NLF2 546 aaPredicted RBP13.24□□□□□ -0.29
LIG1-215ENST00000597901 FTCDNL1E5RQL4 147 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 H7C1Q1 480 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 ABCD4O14678 606 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 SERPINB7O75635 380 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 AHSA1O95433 338 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 HOXB4P17483 251 aaPredicted RBP13.24□□□□□ -0.29
LIG1-215ENST00000597901 RPS5P46782 204 aaKnown RBP13.24□□□□□ -0.29
LIG1-215ENST00000597901 ZNF83P51522 516 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 TGFBR3Q03167 851 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 PGGHGQ32M88 737 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 ELOA3BQ3SY89 546 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 METTL21CQ5VZV1 264 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 CLEC9AQ6UXN8 241 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 Q71RC1 249 aaPredicted RBP13.24□□□□□ -0.29
LIG1-215ENST00000597901 EPHX4Q8IUS5 362 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 KDM8Q8N371 416 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 DPP10Q8N608 796 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 ELOA3Q8NG57 546 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 TSPEARQ8WU66 669 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 KTI12Q96EK9 354 aaPredicted RBP13.24□□□□□ -0.29
LIG1-215ENST00000597901 RADILQ96JH8 1075 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 ZNF607Q96SK3 696 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 CPPED1Q9BRF8 314 aaPredicted RBP13.24□□□□□ -0.29
LIG1-215ENST00000597901 PTDSS2Q9BVG9 487 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 C12orf10Q9HB07 376 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 RASD1Q9Y272 281 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 PRR14LQ5THK1 2151 aa13.24□□□□□ -0.29
LIG1-215ENST00000597901 SETD2Q9BYW2 2564 aaPredicted RBP13.24□□□□□ -0.29
LIG1-215ENST00000597901 A0A0G2JND7 137 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 A0A1B0GWA3 101 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 PRORSD1PA6NEY8 169 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 LY6G6DO95868 133 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 CD8AP01732 235 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 PTAFRP25105 342 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 CD40P25942 277 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 HTR2AP28223 471 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 MPGP29372 298 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms