RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	PRPS1	P60891	318 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	VLDLR	P98155	873 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	TGFBR3	Q03167	851 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	GNA13	Q14344	377 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	KLHL24	Q6TFL4	600 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	ZNF836	Q6ZNA1	936 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	AAED1	Q7RTV5	226 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	SPATA19	Q7Z5L4	167 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	GPAT4	Q86UL3	456 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	PEX5L	Q8IYB4	626 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	LRRC34	Q8IZ02	419 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	CADM2	Q8N3J6	435 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	MREG	Q8N565	214 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	ANKRD42	Q8N9B4	389 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	TMEM45B	Q96B21	275 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	FBXO17	Q96EF6	278 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	AURKB	Q96GD4	344 aa	Predicted RBP	9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	KCNK17	Q96T54	332 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	ADAM19	Q9H013	955 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	ADPRHL2	Q9NX46	363 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	GPR45	Q9Y5Y3	372 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	SVEP1	Q4LDE5	3571 aa		9.2	□□□□□ -0.94
LSM4-205	ENST00000597776	IGHV1-18	A0A0C4DH31	117 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	RFXANK	O14593	260 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	LGI1	O95970	557 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	BCHE	P06276	602 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	IGHV4-31	P0DP07	118 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	APOBEC3A	P31941	199 aa	Predicted RBP	9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	SELENOP	P49908	381 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	P2RY4	P51582	365 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	MVD	P53602	400 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	TUBA1B	P68363	451 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	TUBA4A	P68366	448 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	CHRNB3	Q05901	458 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	MST1L	Q2TV78	715 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	GTDC1	Q4AE62	458 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	LIN52	Q52LA3	116 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	TUBA1A	Q71U36	451 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	LINGO2	Q7L985	606 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	ZNF440	Q8IYI8	595 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	KIRREL3	Q8IZU9	778 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	CLIP4	Q8N3C7	705 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	ARIH2OS	Q8N7S6	290 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	POMGNT2	Q8NAT1	580 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	OR52P1P	Q8NH57	321 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	SORCS2	Q96PQ0	1159 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	ALKBH3	Q96Q83	286 aa	Predicted RBP	9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	ZBTB18	Q99592	522 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	P2RX2	Q9UBL9	471 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	CDC42EP3	Q9UKI2	254 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	ZNF443	Q9Y2A4	671 aa	Predicted RBP	9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	DSPP	Q9NZW4	1301 aa		9.19	□□□□□ -0.94
LSM4-205	ENST00000597776	NR5A2	O00482	541 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	FRS3	O43559	492 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	KRT33A	O76009	404 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	KRT75	O95678	551 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	WNT11	O96014	354 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	CSF3	P09919	207 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	KIT	P10721	976 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	BMP4	P12644	408 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	USF1	P22415	310 aa	Predicted RBP	9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	CRAT	P43155	626 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	MAP2K6	P52564	334 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	TXNL4A	P83876	142 aa	Known RBP	9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	GGTLC2	Q14390	218 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	CARTPT	Q16568	116 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	GSTA3	Q16772	222 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	SWI5	Q1ZZU3	235 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	TBRG1	Q3YBR2	411 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	TNFAIP8L3	Q5GJ75	292 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	CEP85L	Q5SZL2	805 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	HHAT	Q5VTY9	493 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	PRAMEF8	Q5VWM4	474 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	PRAMEF7	Q5VXH5	474 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	CYB5R2	Q6BCY4	276 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	NXN	Q6DKJ4	435 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	TMEM225	Q6GV28	225 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	WBP2NL	Q6ICG8	309 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	IL17REL	Q6ZVW7	336 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	CREB3L2	Q70SY1	520 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	SERPINA11	Q86U17	422 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	ANKS4B	Q8N8V4	417 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	OR1K1	Q8NGR3	316 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	SLC38A5	Q8WUX1	472 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	TMEM158	Q8WZ71	300 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	PROX1	Q92786	737 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	VPS33A	Q96AX1	596 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	SLC38A2	Q96QD8	506 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	SF3B5	Q9BWJ5	86 aa	Known RBP	9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	BEX2	Q9BXY8	128 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	PARD6B	Q9BYG5	372 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	SEC61A2	Q9H9S3	476 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	CHST2	Q9Y4C5	530 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776	PMF1-BGLAP	U3KQ54	211 aa		9.18	□□□□□ -0.94
LSM4-205	ENST00000597776		A0A096LPE4	126 aa		9.17	□□□□□ -0.94
LSM4-205	ENST00000597776		A0A1W2PPZ6	126 aa		9.17	□□□□□ -0.94
LSM4-205	ENST00000597776		A8MVM7	634 aa		9.17	□□□□□ -0.94
LSM4-205	ENST00000597776	ZNF587B	E7ETH6	402 aa		9.17	□□□□□ -0.94
LSM4-205	ENST00000597776	HDAC3	O15379	428 aa		9.17	□□□□□ -0.94

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