RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 DEFA5Q01523 94 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 CBFBQ13951 182 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 OR1Q1Q15612 314 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 EIPR1Q53HC9 387 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 PDSS1Q5T2R2 415 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 PWWP2BQ6NUJ5 590 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 SLC25A18Q9H1K4 315 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 CCDC86Q9H6F5 360 aaKnown RBP14.29□□□□□ -0.12
IRF3-219ENST00000597636 C6orf106Q9H6K1 298 aaPredicted RBP14.29□□□□□ -0.12
IRF3-219ENST00000597636 DENND4CQ5VZ89 1909 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 MDC1Q14676 2089 aaKnown RBP14.29□□□□□ -0.12
IRF3-219ENST00000597636 TBC1D3EA0A087X179 549 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 SIGLEC5O15389 551 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 SPDEFO95238 335 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 RLN2P04090 185 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 RAB40ALP0C0E4 278 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 OR2T7P0C7T2 308 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 GKN3PP0CG01 181 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 MAPK3P27361 379 aaPredicted RBP14.29□□□□□ -0.12
IRF3-219ENST00000597636 BCL6P41182 706 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 PRDX1Q06830 199 aaKnown RBP14.29□□□□□ -0.12
IRF3-219ENST00000597636 SIGLEC14Q08ET2 396 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 PLPP4Q5VZY2 271 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 PAQR7Q86WK9 346 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 PXT1Q8NFP0 134 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 OR2T27Q8NH04 317 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 RAB40AQ8WXH6 277 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 ZMYND19Q96E35 227 aaPredicted RBP14.29□□□□□ -0.12
IRF3-219ENST00000597636 SLC25A32Q9H2D1 315 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 HEATR5BQ9P2D3 2071 aa14.29□□□□□ -0.12
IRF3-219ENST00000597636 HIDE1A8MVS5 230 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 C6P13671 934 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 ART1P52961 327 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 DPTQ07507 201 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 ILF3Q12906 894 aaKnown RBP eCLIP14.28□□□□□ -0.12
IRF3-219ENST00000597636 DUSP8Q13202 625 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 CEBPEQ15744 281 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 STPG1Q5TH74 334 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 MFSD12Q6NUT3 480 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 OR2AK2Q8NG84 335 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 SNX33Q8WV41 574 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 DNTTIP1Q9H147 329 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 SPHK2Q9NRA0 654 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 ZNF780BQ9Y6R6 833 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 KIAA1549LQ6ZVL6 1849 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 A0A1B0GW55 424 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 CXCL14O95715 111 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 DUX4L2P0CJ85 424 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 DUX4L3P0CJ86 424 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 DUX4L4P0CJ87 422 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 DUX4L5P0CJ88 424 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 DUX4L6P0CJ89 424 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 DUX4L7P0CJ90 424 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 CDK2P24941 298 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 MST1P26927 711 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 CERS1P27544 350 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 MPGP29372 298 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 RPS15P62841 145 aaKnown RBP14.28□□□□□ -0.12
IRF3-219ENST00000597636 STX4Q12846 297 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 LY6G5CQ5SRR4 150 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 TMEM240Q5SV17 173 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 FAM111BQ6SJ93 734 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 RELL2Q8NC24 303 aaPredicted RBP14.28□□□□□ -0.12
IRF3-219ENST00000597636 KCT2Q8NC54 265 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 HAVCR1Q96D42 359 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 MFFQ9GZY8 342 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 DUX4Q9UBX2 424 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 OR5V1Q9UGF6 321 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 PURGQ9UJV8 347 aaKnown RBP14.28□□□□□ -0.12
IRF3-219ENST00000597636 GNG8Q9UK08 70 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 V9GY05 133 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 TRIOO75962 3097 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 TBC1D3KA0A087X1G2 549 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 TBC1D3BA6NDS4 549 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 TBC1D3FA6NER0 549 aaPredicted RBP14.28□□□□□ -0.12
IRF3-219ENST00000597636 ACOD1A6NK06 481 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 SIGLEC6O43699 453 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 GPRIN2O60269 458 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 CDC123O75794 336 aaPredicted RBP14.28□□□□□ -0.12
IRF3-219ENST00000597636 THBS1P07996 1170 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 TBC1D3GQ6DHY5 549 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 SLC6A5Q9Y345 797 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 MED31Q9Y3C7 131 aa14.28□□□□□ -0.12
IRF3-219ENST00000597636 GOLGA4Q13439 2230 aaKnown RBP14.27□□□□□ -0.12
IRF3-219ENST00000597636 SYNDIG1LA6NDD5 238 aa14.27□□□□□ -0.12
IRF3-219ENST00000597636 GOSR2O14653 212 aa14.27□□□□□ -0.12
IRF3-219ENST00000597636 PRAMEF2O60811 474 aa14.27□□□□□ -0.12
IRF3-219ENST00000597636 TMEM127O75204 238 aa14.27□□□□□ -0.12
IRF3-219ENST00000597636 AGR2O95994 175 aa14.27□□□□□ -0.12
IRF3-219ENST00000597636 RPA2P15927 270 aa14.27□□□□□ -0.12
IRF3-219ENST00000597636 PSMB10P40306 273 aa14.27□□□□□ -0.12
IRF3-219ENST00000597636 ARHGAP11BQ3KRB8 267 aa14.27□□□□□ -0.12
IRF3-219ENST00000597636 DCAF12L2Q5VW00 463 aa14.27□□□□□ -0.12
IRF3-219ENST00000597636 OR7G2Q8NG99 324 aa14.27□□□□□ -0.12
IRF3-219ENST00000597636 OR2A1Q8NGT9 310 aa14.27□□□□□ -0.12
IRF3-219ENST00000597636 MEPEQ9NQ76 525 aaPredicted RBP14.27□□□□□ -0.12
IRF3-219ENST00000597636 TM7SF3Q9NS93 570 aa14.27□□□□□ -0.12
IRF3-219ENST00000597636 MRTO4Q9UKD2 239 aaKnown RBP14.27□□□□□ -0.12
IRF3-219ENST00000597636 PLCL2Q9UPR0 1127 aa14.27□□□□□ -0.12
IRF3-219ENST00000597636 NUMA1Q14980 2115 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms