RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 FTCDNL1E5RQL4 147 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 CYTIPO60759 359 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 ZG16O60844 167 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 FZD7O75084 574 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 DIRAS1O95057 198 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 PLGP00747 810 aaPredicted RBP12.83□□□□□ -0.36
VRK3-213ENST00000597215 CRHP06850 196 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 H1F0P07305 194 aaKnown RBP12.83□□□□□ -0.36
VRK3-213ENST00000597215 AGAP20933 346 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 PTNP21246 168 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 CTSSP25774 331 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 CHRNB4P30926 498 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 MAGEA2P43356 314 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 SMIM11AP58511 58 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 SPIBQ01892 262 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 SRSF1Q07955 248 aaKnown RBP eCLIP12.83□□□□□ -0.36
VRK3-213ENST00000597215 FOXD4Q12950 439 aaPredicted RBP12.83□□□□□ -0.36
VRK3-213ENST00000597215 ABLIM2Q6H8Q1 611 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 CLEC18BQ6UXF7 455 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 PIWIL3Q7Z3Z3 882 aaKnown RBP12.83□□□□□ -0.36
VRK3-213ENST00000597215 ADGRG5Q8IZF4 528 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 GCNT2Q8N0V5 402 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 ZNF808Q8N4W9 903 aaPredicted RBP12.83□□□□□ -0.36
VRK3-213ENST00000597215 CLEC18CQ8NCF0 446 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 NAXEQ8NCW5 288 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 PIGXQ8TBF5 258 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 SSC4DQ8WTU2 575 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 TMEM255BQ8WV15 326 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 ASB5Q8WWX0 329 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 TAAR8Q969N4 342 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 SDCCAG3Q96C92 435 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 INTS12Q96CB8 462 aaKnown RBP12.83□□□□□ -0.36
VRK3-213ENST00000597215 SLC25A36Q96CQ1 311 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 GMPPAQ96IJ6 420 aaPredicted RBP12.83□□□□□ -0.36
VRK3-213ENST00000597215 RSRC1Q96IZ7 334 aaKnown RBP12.83□□□□□ -0.36
VRK3-213ENST00000597215 DHRS1Q96LJ7 313 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 KLHL4Q9C0H6 718 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 GP6Q9HCN6 339 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 MAN2C1Q9NTJ4 1040 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 C6orf203Q9P0P8 240 aaPredicted RBP12.83□□□□□ -0.36
VRK3-213ENST00000597215 KLHL9Q9P2J3 617 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 AURKCQ9UQB9 309 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 RNF6Q9Y252 685 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 MED31Q9Y3C7 131 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 A0A1W2PRQ8 180 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 KPNA4O00629 521 aaPredicted RBP12.82□□□□□ -0.36
VRK3-213ENST00000597215 SS18L1O75177 396 aaPredicted RBP12.82□□□□□ -0.36
VRK3-213ENST00000597215 IL18BPO95998 194 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 MT-ATP6P00846 226 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 IGF2P01344 180 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 BGLAPP02818 100 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 MT-ND1P03886 318 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 KLK2P20151 261 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 UGT2B15P54855 530 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 H3F3AP84243 136 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 RASGEF1BQ0VAM2 473 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 DGCR6Q14129 220 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 ZSCAN26Q16670 478 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 FGD3Q5JSP0 725 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 OTUD3Q5T2D3 398 aaPredicted RBP12.82□□□□□ -0.36
VRK3-213ENST00000597215 EEF1A1P5Q5VTE0 462 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 XKRXQ6PP77 449 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 MRGPRGQ86SM5 289 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 CCDC71Q8IV32 467 aaPredicted RBP12.82□□□□□ -0.36
VRK3-213ENST00000597215 C10orf53Q8N6V4 93 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 ABHD3Q8WU67 409 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 CANT1Q8WVQ1 401 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 ITLN2Q8WWU7 325 aaPredicted RBP12.82□□□□□ -0.36
VRK3-213ENST00000597215 ACOT11Q8WXI4 607 aaPredicted RBP12.82□□□□□ -0.36
VRK3-213ENST00000597215 UTP4Q969X6 686 aaKnown RBP12.82□□□□□ -0.36
VRK3-213ENST00000597215 RAB3IPQ96QF0 476 aaPredicted RBP12.82□□□□□ -0.36
VRK3-213ENST00000597215 TACO1Q9BSH4 297 aaKnown RBP12.82□□□□□ -0.36
VRK3-213ENST00000597215 SFXN3Q9BWM7 321 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 ZNF629Q9UEG4 869 aaPredicted RBP12.82□□□□□ -0.36
VRK3-213ENST00000597215 TESMINQ9Y4I5 508 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 CORINQ9Y5Q5 1042 aa12.82□□□□□ -0.36
VRK3-213ENST00000597215 HELZ2Q9BYK8 2649 aaKnown RBP12.82□□□□□ -0.36
VRK3-213ENST00000597215 INTS1Q8N201 2190 aaKnown RBP12.81□□□□□ -0.36
VRK3-213ENST00000597215 A0A1W2PNV4 684 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 HTR3EA5X5Y0 456 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 WIPF3A6NGB9 483 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 AQP7P3A6NL99 342 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 ENO4A6NNW6 628 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 DVL2O14641 736 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 AKR7A3O95154 331 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 GADD45GO95257 159 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 FUT4P22083 530 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 RRM2P31350 389 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 OPRM1P35372 400 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 CTBP2P56545 445 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 PDK3Q15120 406 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 GUSBP1Q15486 140 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 ZNF74Q16587 644 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 ZNF730Q6ZMV8 503 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 RRM2BQ7LG56 351 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 MAMDC2Q7Z304 686 aaPredicted RBP12.81□□□□□ -0.36
VRK3-213ENST00000597215 RNF113BQ8IZP6 322 aaKnown RBP12.81□□□□□ -0.36
VRK3-213ENST00000597215 TMEM99Q8N816 258 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 SCAIQ8N9R8 606 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 PFN4Q8NHR9 129 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms