RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 ERICH5Q6P6B1 374 aa18.67■□□□□ 0.58
PNKP-209ENST00000596726 ELOA3Q8NG57 546 aa18.67■□□□□ 0.58
PNKP-209ENST00000596726 MFSD8Q8NHS3 518 aa18.67■□□□□ 0.58
PNKP-209ENST00000596726 TAPBPLQ9BX59 468 aa18.67■□□□□ 0.58
PNKP-209ENST00000596726 TMEM27Q9HBJ8 222 aa18.67■□□□□ 0.58
PNKP-209ENST00000596726 FLVCR1Q9Y5Y0 555 aa18.67■□□□□ 0.58
PNKP-209ENST00000596726 CCDC168Q8NDH2 2452 aa18.67■□□□□ 0.58
PNKP-209ENST00000596726 IGKV1D-42A0A075B6H8 117 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 A0A087WUJ7 227 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 A0A0B4J2E0 115 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 A0A1B0GX12 115 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 A0A1W2PPR1 153 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 FAM220BPB1ANY3 271 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 M0R3H8 397 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 NCALDP61601 193 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 GNGT1P63211 74 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 NPTX1Q15818 432 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 C8orf82Q6P1X6 216 aaPredicted RBP18.66■□□□□ 0.58
PNKP-209ENST00000596726 C5orf46Q6UWT4 87 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.66■□□□□ 0.58
PNKP-209ENST00000596726 CPLX4Q7Z7G2 160 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 RANBP3LQ86VV4 465 aaPredicted RBP18.66■□□□□ 0.58
PNKP-209ENST00000596726 ZNF100Q8IYN0 542 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 STEAP2Q8NFT2 490 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 OR4D11Q8NGI4 311 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 OR6T1Q8NGN1 323 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 KTI12Q96EK9 354 aaPredicted RBP18.66■□□□□ 0.58
PNKP-209ENST00000596726 SLC47A1Q96FL8 570 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 MCHR1Q99705 422 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 SF3B5Q9BWJ5 86 aaKnown RBP18.66■□□□□ 0.58
PNKP-209ENST00000596726 ACTR6Q9GZN1 396 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 FAM107BQ9H098 131 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 LIME1Q9H400 295 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 PLEKHF2Q9H8W4 249 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 CMTM6Q9NX76 183 aa18.66■□□□□ 0.58
PNKP-209ENST00000596726 C6orf203Q9P0P8 240 aaPredicted RBP18.66■□□□□ 0.58
PNKP-209ENST00000596726 CCT8L1PA6NM43 557 aa18.65■□□□□ 0.58
PNKP-209ENST00000596726 AIM2O14862 343 aa18.65■□□□□ 0.58
PNKP-209ENST00000596726 AHSA1O95433 338 aa18.65■□□□□ 0.58
PNKP-209ENST00000596726 LOXP28300 417 aaPredicted RBP18.65■□□□□ 0.58
PNKP-209ENST00000596726 DNAJA1P31689 397 aaKnown RBP18.65■□□□□ 0.58
PNKP-209ENST00000596726 ITGADQ13349 1161 aa18.65■□□□□ 0.58
PNKP-209ENST00000596726 POU4F3Q15319 338 aa18.65■□□□□ 0.58
PNKP-209ENST00000596726 ZIC4Q8N9L1 334 aa18.65■□□□□ 0.58
PNKP-209ENST00000596726 SLC26A7Q8TE54 656 aa18.65■□□□□ 0.58
PNKP-209ENST00000596726 RASSF5Q8WWW0 418 aa18.65■□□□□ 0.58
PNKP-209ENST00000596726 ZC3HAV1LQ96H79 300 aaKnown RBP18.65■□□□□ 0.58
PNKP-209ENST00000596726 ADPRHL2Q9NX46 363 aa18.65■□□□□ 0.58
PNKP-209ENST00000596726 SLC9A8Q9Y2E8 581 aa18.65■□□□□ 0.58
PNKP-209ENST00000596726 AP3M1Q9Y2T2 418 aa18.65■□□□□ 0.58
PNKP-209ENST00000596726 KLF4O43474 513 aa18.64■□□□□ 0.57
PNKP-209ENST00000596726 MRPL33O75394 65 aaKnown RBP18.64■□□□□ 0.57
PNKP-209ENST00000596726 COX5AP20674 150 aa18.64■□□□□ 0.57
PNKP-209ENST00000596726 RPS5P46782 204 aaKnown RBP18.64■□□□□ 0.57
PNKP-209ENST00000596726 CDH12P55289 794 aa18.64■□□□□ 0.57
PNKP-209ENST00000596726 TSC22D1Q15714 1073 aa18.64■□□□□ 0.57
PNKP-209ENST00000596726 SWT1Q5T5J6 900 aaKnown RBP18.64■□□□□ 0.57
PNKP-209ENST00000596726 FBXW9Q5XUX1 488 aa18.64■□□□□ 0.57
PNKP-209ENST00000596726 FBXW10Q5XX13 1052 aa18.64■□□□□ 0.57
PNKP-209ENST00000596726 ZNF613Q6PF04 617 aa18.64■□□□□ 0.57
PNKP-209ENST00000596726 HACD2Q6Y1H2 254 aa18.64■□□□□ 0.57
PNKP-209ENST00000596726 ARPINQ7Z6K5 226 aa18.64■□□□□ 0.57
PNKP-209ENST00000596726 RBM45Q8IUH3 476 aaKnown RBP18.64■□□□□ 0.57
PNKP-209ENST00000596726 SLC15A3Q8IY34 581 aa18.64■□□□□ 0.57
PNKP-209ENST00000596726 OR9K2Q8NGE7 335 aa18.64■□□□□ 0.57
PNKP-209ENST00000596726 KISS1RQ969F8 398 aaPredicted RBP18.64■□□□□ 0.57
PNKP-209ENST00000596726 TAAR8Q969N4 342 aa18.64■□□□□ 0.57
PNKP-209ENST00000596726 TMEM45BQ96B21 275 aa18.64■□□□□ 0.57
PNKP-209ENST00000596726 APH1AQ96BI3 265 aa18.64■□□□□ 0.57
PNKP-209ENST00000596726 S100PBPQ96BU1 408 aa18.64■□□□□ 0.57
PNKP-209ENST00000596726 PCDHAC1Q9H158 963 aa18.64■□□□□ 0.57
PNKP-209ENST00000596726 EFCAB1Q9HAE3 211 aa18.64■□□□□ 0.57
PNKP-209ENST00000596726 OR2T1O43869 369 aa18.63■□□□□ 0.57
PNKP-209ENST00000596726 VAMP5O95183 116 aa18.63■□□□□ 0.57
PNKP-209ENST00000596726 IGHV1-2P23083 117 aa18.63■□□□□ 0.57
PNKP-209ENST00000596726 LINC00114Q6XXX2 140 aa18.63■□□□□ 0.57
PNKP-209ENST00000596726 PIGWQ7Z7B1 504 aa18.63■□□□□ 0.57
PNKP-209ENST00000596726 MICU2Q8IYU8 434 aa18.63■□□□□ 0.57
PNKP-209ENST00000596726 OR2T12Q8NG77 320 aa18.63■□□□□ 0.57
PNKP-209ENST00000596726 OR6S1Q8NH40 331 aa18.63■□□□□ 0.57
PNKP-209ENST00000596726 HOPXQ9BPY8 73 aaPredicted RBP18.63■□□□□ 0.57
PNKP-209ENST00000596726 USB1Q9BQ65 265 aaKnown RBP18.63■□□□□ 0.57
PNKP-209ENST00000596726 PARPBPQ9NWS1 579 aa18.63■□□□□ 0.57
PNKP-209ENST00000596726 SELENONQ9NZV5 590 aa18.63■□□□□ 0.57
PNKP-209ENST00000596726 ST6GALNAC2Q9UJ37 374 aa18.63■□□□□ 0.57
PNKP-209ENST00000596726 TRAV36DV7A0A075B6V5 113 aa18.62■□□□□ 0.57
PNKP-209ENST00000596726 ELOVL7A1L3X0 281 aa18.62■□□□□ 0.57
PNKP-209ENST00000596726 LYPD3O95274 346 aa18.62■□□□□ 0.57
PNKP-209ENST00000596726 IL32P24001 234 aa18.62■□□□□ 0.57
PNKP-209ENST00000596726 PRDX6P30041 224 aa18.62■□□□□ 0.57
PNKP-209ENST00000596726 ENTPD8Q5MY95 495 aa18.62■□□□□ 0.57
PNKP-209ENST00000596726 FAM69AQ5T7M9 428 aa18.62■□□□□ 0.57
PNKP-209ENST00000596726 TMEM225Q6GV28 225 aa18.62■□□□□ 0.57
PNKP-209ENST00000596726 BHLHA15Q7RTS1 189 aaPredicted RBP18.62■□□□□ 0.57
PNKP-209ENST00000596726 TSPYL5Q86VY4 417 aaPredicted RBP18.62■□□□□ 0.57
PNKP-209ENST00000596726 ZNF433Q8N7K0 673 aaPredicted RBP18.62■□□□□ 0.57
PNKP-209ENST00000596726 VANGL1Q8TAA9 524 aaPredicted RBP18.62■□□□□ 0.57
PNKP-209ENST00000596726 NINJ1Q92982 152 aa18.62■□□□□ 0.57
PNKP-209ENST00000596726 SLC25A36Q96CQ1 311 aa18.62■□□□□ 0.57
PNKP-209ENST00000596726 CMTM5Q96DZ9 223 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms