RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 POMGNT2Q8NAT1 580 aa13.9□□□□□ -0.18
LINC02560-201ENST00000596379 PNPT1Q8TCS8 783 aaKnown RBP13.9□□□□□ -0.18
LINC02560-201ENST00000596379 AENQ8WTP8 325 aaKnown RBP13.9□□□□□ -0.18
LINC02560-201ENST00000596379 TMEM109Q9BVC6 243 aa13.9□□□□□ -0.18
LINC02560-201ENST00000596379 PNPOQ9NVS9 261 aa13.9□□□□□ -0.18
LINC02560-201ENST00000596379 RLIMQ9NVW2 624 aa13.9□□□□□ -0.18
LINC02560-201ENST00000596379 VWC2LB2RUY7 222 aa13.89□□□□□ -0.19
LINC02560-201ENST00000596379 ALDOCP09972 364 aaKnown RBP13.89□□□□□ -0.19
LINC02560-201ENST00000596379 BGNP21810 368 aa13.89□□□□□ -0.19
LINC02560-201ENST00000596379 IL12AP29459 219 aa13.89□□□□□ -0.19
LINC02560-201ENST00000596379 GZMKP49863 264 aa13.89□□□□□ -0.19
LINC02560-201ENST00000596379 ANXA11P50995 505 aaKnown RBP13.89□□□□□ -0.19
LINC02560-201ENST00000596379 TXNL4AP83876 142 aaKnown RBP13.89□□□□□ -0.19
LINC02560-201ENST00000596379 BNIP2Q12982 314 aa13.89□□□□□ -0.19
LINC02560-201ENST00000596379 GGTLC2Q14390 218 aa13.89□□□□□ -0.19
LINC02560-201ENST00000596379 TMEM225Q6GV28 225 aa13.89□□□□□ -0.19
LINC02560-201ENST00000596379 PEX5LQ8IYB4 626 aa13.89□□□□□ -0.19
LINC02560-201ENST00000596379 SORCS2Q96PQ0 1159 aa13.89□□□□□ -0.19
LINC02560-201ENST00000596379 OR52E6Q96RD3 313 aa13.89□□□□□ -0.19
LINC02560-201ENST00000596379 MEAF6Q9HAF1 191 aa13.89□□□□□ -0.19
LINC02560-201ENST00000596379 TMEM45AQ9NWC5 275 aa13.89□□□□□ -0.19
LINC02560-201ENST00000596379 IGHV1-18A0A0C4DH31 117 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 AQP7P3A6NL99 342 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 KRT33AO76009 404 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 SNUPNO95149 360 aaKnown RBP13.88□□□□□ -0.19
LINC02560-201ENST00000596379 LGI1O95970 557 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 PGRP06401 933 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 LGALS3BPQ08380 585 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 STX3Q13277 289 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 MAPK11Q15759 364 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 KRTAP24-1Q3LI83 254 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 KRT71Q3SY84 523 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 TBRG1Q3YBR2 411 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 OGFOD2Q6N063 350 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 ABHD12BQ7Z5M8 362 aaPredicted RBP13.88□□□□□ -0.19
LINC02560-201ENST00000596379 VRK2Q86Y07 508 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 ZNF440Q8IYI8 595 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 CADM2Q8N3J6 435 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 OR1K1Q8NGR3 316 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 OR52P1PQ8NH57 321 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 BOD1Q96IK1 185 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 FOXN4Q96NZ1 517 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 SLC38A2Q96QD8 506 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 VRK1Q99986 396 aaPredicted RBP13.88□□□□□ -0.19
LINC02560-201ENST00000596379 PIMREGQ9BSJ6 248 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 PRR14Q9BWN1 585 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 TAPBPLQ9BX59 468 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 PIF1Q9H611 641 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 CHODLQ9H9P2 273 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 ADPRHL2Q9NX46 363 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 HAO1Q9UJM8 370 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 FKBP7Q9Y680 259 aa13.88□□□□□ -0.19
LINC02560-201ENST00000596379 LOC100289279A0A1B0GTE1 492 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 SLC35F4A4IF30 521 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 CDHR4A6H8M9 788 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 NDUFS8O00217 210 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 TM9SF1O15321 606 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 RGS16O15492 202 aaPredicted RBP13.87□□□□□ -0.19
LINC02560-201ENST00000596379 IGFBP5P24593 272 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 SERPINF1P36955 418 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 ACAA2P42765 397 aaKnown RBP13.87□□□□□ -0.19
LINC02560-201ENST00000596379 NR4A2P43354 598 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 SELENOPP49908 381 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 P2RY4P51582 365 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 SNRPD2P62316 118 aaKnown RBP13.87□□□□□ -0.19
LINC02560-201ENST00000596379 MPP2Q14168 576 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 CARTPTQ16568 116 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 WBP2NLQ6ICG8 309 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 FAM166AQ6J272 317 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 ZNF836Q6ZNA1 936 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 CREB3L2Q70SY1 520 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 KIRREL3Q8IZU9 778 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 ANKS4BQ8N8V4 417 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 C3orf49Q96BT1 292 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 MSI2Q96DH6 328 aaKnown RBP13.87□□□□□ -0.19
LINC02560-201ENST00000596379 KCNS3Q9BQ31 491 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 SSU72Q9NP77 194 aaKnown RBP13.87□□□□□ -0.19
LINC02560-201ENST00000596379 OBP2BQ9NPH6 170 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 AIG1Q9NVV5 245 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 KCNS2Q9ULS6 477 aa13.87□□□□□ -0.19
LINC02560-201ENST00000596379 A8MVM7 634 aa13.86□□□□□ -0.19
LINC02560-201ENST00000596379 ZNF587BE7ETH6 402 aa13.86□□□□□ -0.19
LINC02560-201ENST00000596379 NR5A2O00482 541 aa13.86□□□□□ -0.19
LINC02560-201ENST00000596379 SDHDO14521 159 aa13.86□□□□□ -0.19
LINC02560-201ENST00000596379 VAMP5O95183 116 aa13.86□□□□□ -0.19
LINC02560-201ENST00000596379 KRT75O95678 551 aa13.86□□□□□ -0.19
LINC02560-201ENST00000596379 CRYAAP02489 173 aa13.86□□□□□ -0.19
LINC02560-201ENST00000596379 SRD5A1P18405 259 aa13.86□□□□□ -0.19
LINC02560-201ENST00000596379 THBS2P35442 1172 aa13.86□□□□□ -0.19
LINC02560-201ENST00000596379 UBE2NP61088 152 aaKnown RBP13.86□□□□□ -0.19
LINC02560-201ENST00000596379 COPZ1P61923 177 aa13.86□□□□□ -0.19
LINC02560-201ENST00000596379 SRSF2Q01130 221 aaKnown RBP13.86□□□□□ -0.19
LINC02560-201ENST00000596379 LRRC74AQ0VAA2 488 aa13.86□□□□□ -0.19
LINC02560-201ENST00000596379 FAM120AOSQ5T036 256 aa13.86□□□□□ -0.19
LINC02560-201ENST00000596379 IL17RELQ6ZVW7 336 aa13.86□□□□□ -0.19
LINC02560-201ENST00000596379 LINGO2Q7L985 606 aa13.86□□□□□ -0.19
LINC02560-201ENST00000596379 SLC46A3Q7Z3Q1 461 aa13.86□□□□□ -0.19
LINC02560-201ENST00000596379 SPATA19Q7Z5L4 167 aa13.86□□□□□ -0.19
LINC02560-201ENST00000596379 EPHX4Q8IUS5 362 aa13.86□□□□□ -0.19
LINC02560-201ENST00000596379 BCL2L2Q92843 193 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms