RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 INTS11Q5TA45 600 aaKnown RBP9.88□□□□□ -0.83
VRK3-210ENST00000596121 FAM91A1Q658Y4 838 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 ERICH5Q6P6B1 374 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 ULK3Q6PHR2 472 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 CXorf67Q86X51 503 aaPredicted RBP9.88□□□□□ -0.83
VRK3-210ENST00000596121 CARM1Q86X55 608 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 GABRG1Q8N1C3 465 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 ELOA3Q8NG57 546 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 DNAJA4Q8WW22 397 aaPredicted RBP9.88□□□□□ -0.83
VRK3-210ENST00000596121 NRGNQ92686 78 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 CMTM5Q96DZ9 223 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 KLHL4Q9C0H6 718 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 C12orf10Q9HB07 376 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 TMEM27Q9HBJ8 222 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 ABCD2Q9UBJ2 740 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 RPS6KB2Q9UBS0 482 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 ALPK2Q86TB3 2170 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 AQP7P3A6NL99 342 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 CPSF4LA6NMK7 179 aaKnown RBP9.87□□□□□ -0.83
VRK3-210ENST00000596121 A6NNC1 897 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 LRRN3E7EW58 273 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 EIF1BO60739 113 aaKnown RBP9.87□□□□□ -0.83
VRK3-210ENST00000596121 FMO6PO60774 539 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 IGHV3-9P01782 118 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 GPIP06744 558 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 OR1E2P47887 323 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 LRRC23Q53EV4 343 aaPredicted RBP9.87□□□□□ -0.83
VRK3-210ENST00000596121 OTUD3Q5T2D3 398 aaPredicted RBP9.87□□□□□ -0.83
VRK3-210ENST00000596121 PAQR6Q6TCH4 344 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 ARPINQ7Z6K5 226 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 GALNT5Q7Z7M9 940 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 KDM8Q8N371 416 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 FITM2Q8N6M3 262 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 ANKS4BQ8N8V4 417 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 MFSD8Q8NHS3 518 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 PIGXQ8TBF5 258 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 SLC26A7Q8TE54 656 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 SLC25A36Q96CQ1 311 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 SLC47A1Q96FL8 570 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 DACH2Q96NX9 599 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 ZNF385AQ96PM9 386 aaKnown RBP9.87□□□□□ -0.83
VRK3-210ENST00000596121 PRSS27Q9BQR3 290 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 PCDHAC1Q9H158 963 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 LIME1Q9H400 295 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 RASSF1Q9NS23 344 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 ADPRHL2Q9NX46 363 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 SLC13A4Q9UKG4 626 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 ADAM21Q9UKJ8 722 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 SH3GLB1Q9Y371 365 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 FLVCR1Q9Y5Y0 555 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 CREBBPQ92793 2442 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 CCDC168Q8NDH2 2452 aa9.87□□□□□ -0.83
VRK3-210ENST00000596121 DEFB108AA8MXU0 73 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 CXCR6O00574 342 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 AHSA1O95433 338 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 FAM107AO95990 144 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 HPRP00739 348 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 ADAP00813 363 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 BGLAPP02818 100 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 HRGP04196 525 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 PNMTP11086 282 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 NCK1P16333 377 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 CBLP22681 906 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 LOXP28300 417 aaPredicted RBP9.86□□□□□ -0.83
VRK3-210ENST00000596121 GRPRP30550 384 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 PEX19P40855 299 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 SLC25A3Q00325 362 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 POU4F3Q15319 338 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 ZNF613Q6PF04 617 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 NHLRC1Q6VVB1 395 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 BEND4Q6ZU67 534 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 TSEN54Q7Z6J9 526 aaKnown RBP9.86□□□□□ -0.83
VRK3-210ENST00000596121 VTCN1Q7Z7D3 282 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 RANBP3LQ86VV4 465 aaPredicted RBP9.86□□□□□ -0.83
VRK3-210ENST00000596121 EPHX4Q8IUS5 362 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 WDFY1Q8IWB7 410 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 RNF148Q8N7C7 305 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 FAM156AQ8NDB6 213 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 OR9K2Q8NGE7 335 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 RNF217Q8TC41 542 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 ADAMTS16Q8TE57 1224 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 ZHX1-C8orf76Q96EF9 292 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 ZC3HAV1LQ96H79 300 aaKnown RBP9.86□□□□□ -0.83
VRK3-210ENST00000596121 MOGAT1Q96PD6 335 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 LRRC37BQ96QE4 947 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 TACO1Q9BSH4 297 aaKnown RBP9.86□□□□□ -0.83
VRK3-210ENST00000596121 NAA11Q9BSU3 229 aaPredicted RBP9.86□□□□□ -0.83
VRK3-210ENST00000596121 ALG2Q9H553 416 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 EVA1AQ9H8M9 152 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 C6orf203Q9P0P8 240 aaPredicted RBP9.86□□□□□ -0.83
VRK3-210ENST00000596121 B3GAT1Q9P2W7 334 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 NOSIPQ9Y314 301 aaKnown RBP9.86□□□□□ -0.83
VRK3-210ENST00000596121 SNX13Q9Y5W8 968 aa9.86□□□□□ -0.83
VRK3-210ENST00000596121 TRAV36DV7A0A075B6V5 113 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 MS4A18H0YCH9 400 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 M0R082 166 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 T-ENOLP0DO92 83 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 PSMB1P20618 241 aaKnown RBP9.85□□□□□ -0.83
VRK3-210ENST00000596121 IGHV1-2P23083 117 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 NCALDP61601 193 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms