RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 ACSM5Q6NUN0 579 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 UGT2A3Q6UWM9 527 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 THSD4Q6ZMP0 1018 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 THAP5Q7Z6K1 395 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 ZADH2Q8N4Q0 377 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 TMEM251Q8N6I4 163 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 IQCF1Q8N6M8 205 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 LRRC75AQ8NAA5 344 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 OR51A7Q8NH64 312 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 TM9SF4Q92544 642 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 NR1H4Q96RI1 486 aaPredicted RBP13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 APOL4Q9BPW4 351 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 TSSK6Q9BXA6 273 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 NANSQ9NR45 359 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 ZNF226Q9NYT6 803 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 RNF6Q9Y252 685 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 RPH3AQ9Y2J0 694 aaPredicted RBP13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 HIF3AQ9Y2N7 669 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 SVILO95425 2214 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 LIPT2A6NK58 231 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 BHLHE40O14503 412 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 NDUFB2O95178 105 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 SHC1P29353 583 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 GRK5P34947 590 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 IDUAP35475 653 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 RFC3P40938 356 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 SMSP52788 366 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 GFRA1P56159 465 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 RAC1P63000 192 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 EFNB1P98172 346 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 PGGHGQ32M88 737 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 LAIR2Q6ISS4 152 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 SLC27A4Q6P1M0 643 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 MAMDC2Q7Z304 686 aaPredicted RBP13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 ENTHD1Q8IYW4 607 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 DEPDC4Q8N2C3 294 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 C10orf53Q8N6V4 93 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 OR14L1PQ8NHC6 308 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 FAM81AQ8TBF8 368 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 GPX7Q96SL4 187 aaPredicted RBP13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 TBC1D23Q9NUY8 699 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 HDGFL3Q9Y3E1 203 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 GTF3C1Q12789 2109 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 PKD1L2Q7Z442 2459 aa13.27□□□□□ -0.29
SHKBP1-211ENST00000595945 LOC400499M0QZD8 3231 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 FAM166BA8MTA8 275 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 H3BML4 177 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 MKRN2OSH3BPM6 223 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 K7EM74 188 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 ITGB2P05107 769 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 CELA3AP09093 270 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 TFPIP10646 304 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 PEPDP12955 493 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 GRPRP30550 384 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 SLC6A6P31641 620 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 MAGEA5P43359 124 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 CDC42P60953 191 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 SNRPGP62308 76 aaKnown RBP13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 PPIAP62937 165 aaKnown RBP13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 MYBPC1Q00872 1141 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 PLGLB1Q02325 96 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 MYBPHQ13203 477 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 MFSD13AQ14CX5 517 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 MAD2L1BPQ15013 274 aaPredicted RBP13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 SGCBQ16585 318 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 ZNF239Q16600 458 aaKnown RBP13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 TMEM176BQ3YBM2 270 aaPredicted RBP13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 RNFT1Q5M7Z0 435 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 WIPI1Q5MNZ9 446 aaPredicted RBP13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 Q6ZS92 163 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 SLC22A16Q86VW1 577 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 LNX2Q8N448 690 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 SCAIQ8N9R8 606 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 ATP6V1C2Q8NEY4 427 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 OR52L1Q8NGH7 329 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 MOSPD2Q8NHP6 518 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 RHOXF1Q8NHV9 184 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 APH1BQ8WW43 257 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 UBE2FQ969M7 185 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 SFXN2Q96NB2 322 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 POLDIP3Q9BY77 421 aaKnown RBP13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 ADNPQ9H2P0 1102 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 ACKR4Q9NPB9 350 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 PNPLA3Q9NST1 481 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 MRPL39Q9NYK5 338 aaKnown RBP13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 TRAPPC4Q9Y296 219 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 CORINQ9Y5Q5 1042 aa13.26□□□□□ -0.29
SHKBP1-211ENST00000595945 DSPP15924 2871 aaKnown RBP13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 LINC01387J3KSC0 135 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 WBP4O75554 376 aaKnown RBP13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 TRAPPC6AO75865 159 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 BMP7P18075 431 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 TPD52P55327 224 aaPredicted RBP13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 PRPS1P60891 318 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 IL5RAQ01344 420 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 TEKQ02763 1124 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 C19orf57Q0VDD7 668 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 CDK5R2Q13319 367 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 ZNF169Q14929 603 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms