RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 RETREG3Q86VR2 466 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 TGIF2LYQ8IUE0 185 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 CCDC103Q8IW40 242 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 LRRC75A-AS1Q8N1F1 130 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 C10orf111Q8N326 155 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 OR52E4Q8NGH9 312 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 MFSD8Q8NHS3 518 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 RASSF5Q8WWW0 418 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 SLC38A4Q969I6 547 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 ZNF775Q96BV0 537 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 HS3ST6Q96QI5 342 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 CCL19Q99731 98 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 TMEM204Q9BSN7 226 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 KAT8Q9H7Z6 458 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 RASD1Q9Y272 281 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 MAP1AP78559 2803 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 AKAP6Q13023 2319 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 OR6C65A6NJZ3 312 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 ARHGEF9O43307 516 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 FMO6PO60774 539 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 SMPD2O60906 423 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 LYZL6O75951 148 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 C8BP07358 591 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 CD3EP07766 207 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 IGHV1-2P23083 117 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 PCGF2P35227 344 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 PCBP3P57721 371 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 MTPNP58546 118 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 TGFBR3Q03167 851 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 MFSD13AQ14CX5 517 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 PPA1Q15181 289 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 MMEL1Q495T6 779 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 ALG10BQ5I7T1 473 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 ZNF433Q8N7K0 673 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 POMGNT2Q8NAT1 580 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 PCYOX1LQ8NBM8 494 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 C1orf162Q8NEQ5 155 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 OR9K2Q8NGE7 335 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 OR8J3Q8NGG0 315 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 DNAJA3Q96EY1 480 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 SLC47A1Q96FL8 570 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 EPYCQ99645 322 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 TMEM27Q9HBJ8 222 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 ADPRHL2Q9NX46 363 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 KLHL14Q9P2G3 628 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 UPB1Q9UBR1 384 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 RNF115Q9Y4L5 304 aa15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 ZNF469Q96JG9 3925 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-204ENST00000594862 A0A1B0GWA3 101 aa15.66■□□□□ 0.1
SHKBP1-204ENST00000594862 CIB4A0PJX0 185 aa15.66■□□□□ 0.1
SHKBP1-204ENST00000594862 OR5H1A6NKK0 313 aa15.66■□□□□ 0.1
SHKBP1-204ENST00000594862 RAMP1O60894 148 aa15.66■□□□□ 0.1
SHKBP1-204ENST00000594862 MFN2O95140 757 aa15.66■□□□□ 0.1
SHKBP1-204ENST00000594862 AKR7A3O95154 331 aa15.66■□□□□ 0.1
SHKBP1-204ENST00000594862 AQP1P29972 269 aa15.66■□□□□ 0.1
SHKBP1-204ENST00000594862 GUCY1A3Q02108 690 aa15.66■□□□□ 0.1
SHKBP1-204ENST00000594862 BNIP2Q12982 314 aa15.66■□□□□ 0.1
SHKBP1-204ENST00000594862 TSC22D1Q15714 1073 aa15.66■□□□□ 0.1
SHKBP1-204ENST00000594862 STK11Q15831 433 aa15.66■□□□□ 0.1
SHKBP1-204ENST00000594862 NCMAPQ5T1S8 102 aa15.66■□□□□ 0.1
SHKBP1-204ENST00000594862 FAM69AQ5T7M9 428 aa15.66■□□□□ 0.1
SHKBP1-204ENST00000594862 SHEQ5VZ18 495 aa15.66■□□□□ 0.1
SHKBP1-204ENST00000594862 ADAM5Q6NVV9 412 aa15.66■□□□□ 0.1
SHKBP1-204ENST00000594862 PTOV1Q86YD1 416 aa15.66■□□□□ 0.1
SHKBP1-204ENST00000594862 C17orf78Q8N4C9 275 aa15.66■□□□□ 0.1
SHKBP1-204ENST00000594862 TMEM99Q8N816 258 aa15.66■□□□□ 0.1
SHKBP1-204ENST00000594862 OR6S1Q8NH40 331 aa15.66■□□□□ 0.1
SHKBP1-204ENST00000594862 RAI1Q7Z5J4 1906 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-204ENST00000594862 PRRC2AP48634 2157 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 FREM1Q5H8C1 2179 aa15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 CCT8L1PA6NM43 557 aa15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 HS3ST1O14792 307 aa15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 FZD7O75084 574 aa15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 CD99P14209 185 aa15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 HOXC12P31275 282 aa15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 HOXC5Q00444 222 aa15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 FAPQ12884 760 aa15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 KLF10Q13118 480 aa15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 ERICH5Q6P6B1 374 aa15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 AAED1Q7RTV5 226 aa15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 GPAT4Q86UL3 456 aa15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 ZNF611Q8N823 705 aa15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 SLC26A7Q8TE54 656 aa15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 SLCO5A1Q9H2Y9 848 aa15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 SAR1AQ9NR31 198 aa15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 GID8Q9NWU2 228 aa15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 MAGED1Q9Y5V3 778 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 CAPN7Q9Y6W3 813 aa15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 NIPBLQ6KC79 2804 aaeCLIP15.65■□□□□ 0.1
SHKBP1-204ENST00000594862 TRAV36DV7A0A075B6V5 113 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 A0A0B4J2E0 115 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 A0A1B0GX12 115 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 FTCDNL1E5RQL4 147 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 MRASO14807 208 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 AIM2O14862 343 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 AKAP8O43823 692 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 TPST1O60507 370 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 RAD51DO75771 328 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 IGHV3-9P01782 118 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 PAX7P23759 505 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms