RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 FAM111BQ6SJ93 734 aa14.16□□□□□ -0.14
PNKP-204ENST00000594661 CA13Q8N1Q1 262 aa14.16□□□□□ -0.14
PNKP-204ENST00000594661 ARHGEF39Q8N4T4 335 aa14.16□□□□□ -0.14
PNKP-204ENST00000594661 OR7G2Q8NG99 324 aa14.16□□□□□ -0.14
PNKP-204ENST00000594661 THAP7Q9BT49 309 aaPredicted RBP14.16□□□□□ -0.14
PNKP-204ENST00000594661 ACAD8Q9UKU7 415 aa14.16□□□□□ -0.14
PNKP-204ENST00000594661 SLC9A8Q9Y2E8 581 aa14.16□□□□□ -0.14
PNKP-204ENST00000594661 GSTK1Q9Y2Q3 226 aa14.16□□□□□ -0.14
PNKP-204ENST00000594661 RAB19A4D1S5 217 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 ANXA2P2A6NMY6 339 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 BCAT2O15382 392 aaPredicted RBP14.15□□□□□ -0.14
PNKP-204ENST00000594661 PIAS2O75928 621 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 RAB3BP20337 219 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 CNR2P34972 360 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 GFERP55789 205 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 SMIM11AP58511 58 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 SLC25A25Q6KCM7 469 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 WDR53Q7Z5U6 358 aaPredicted RBP14.15□□□□□ -0.14
PNKP-204ENST00000594661 PDZD9Q8IXQ8 264 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 TMEM203Q969S6 136 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 OR7D2Q96RA2 312 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 FN3KQ9H479 309 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 A4GNTQ9UNA3 340 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 THADAQ6YHU6 1953 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 SDK1Q7Z5N4 2213 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 A0A0G2JPF8 293 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 HNRNPCL3B7ZW38 293 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 L7N2F9 121 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 CYR61O00622 381 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 LDB3O75112 727 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 RDH16O75452 317 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 SOX14O95416 240 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 IGHV2-70P01814 119 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 HNRNPCL4P0DMR1 293 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 TFPIP10646 304 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 OSMP13725 252 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 SOX18P35713 384 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 SELENOPP49908 381 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 RPS25P62851 125 aaKnown RBP14.15□□□□□ -0.14
PNKP-204ENST00000594661 DEFA5Q01523 94 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 VASNQ6EMK4 673 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 OGFOD3Q6PK18 319 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 CD200R1LQ6Q8B3 271 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 ASB18Q6ZVZ8 466 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 OR9A4Q8NGU2 314 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 SLC7A13Q8TCU3 470 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 DDOQ99489 341 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 FNDC11Q9BVV2 318 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 TMPRSS13Q9BYE2 586 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 QRSL1Q9H0R6 528 aaKnown RBP14.15□□□□□ -0.14
PNKP-204ENST00000594661 DUSP15Q9H1R2 295 aaPredicted RBP14.15□□□□□ -0.14
PNKP-204ENST00000594661 METTL17Q9H7H0 456 aaPredicted RBP14.15□□□□□ -0.14
PNKP-204ENST00000594661 C11orf16Q9NQ32 467 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 MYEF2Q9P2K5 600 aaKnown RBP14.15□□□□□ -0.14
PNKP-204ENST00000594661 NDOR1Q9UHB4 597 aa14.15□□□□□ -0.14
PNKP-204ENST00000594661 DSPPQ9NZW4 1301 aa14.15□□□□□ -0.15
PNKP-204ENST00000594661 POM121CA8CG34 1229 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 FGF17O60258 216 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 TOXO94900 526 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 CPMP14384 443 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 PPM1FP49593 454 aaPredicted RBP14.14□□□□□ -0.15
PNKP-204ENST00000594661 AFF3P51826 1226 aaKnown RBP14.14□□□□□ -0.15
PNKP-204ENST00000594661 TPBGQ13641 420 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 C14orf28Q4W4Y0 310 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 PGBD2Q6P3X8 592 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 PAQR6Q6TCH4 344 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 USP53Q70EK8 1073 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 LAPTM4BQ86VI4 370 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 C12orf45Q8N5I9 185 aaPredicted RBP14.14□□□□□ -0.15
PNKP-204ENST00000594661 BMPERQ8N8U9 685 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 OR6T1Q8NGN1 323 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 DOK4Q8TEW6 326 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 CNOT9Q92600 299 aaKnown RBP14.14□□□□□ -0.15
PNKP-204ENST00000594661 ELMOD3Q96FG2 381 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 LCORQ96JN0 433 aaPredicted RBP14.14□□□□□ -0.15
PNKP-204ENST00000594661 RNF32Q9H0A6 362 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 ISYNA1Q9NPH2 558 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 YARS2Q9Y2Z4 477 aaKnown RBP14.14□□□□□ -0.15
PNKP-204ENST00000594661 RPL36Q9Y3U8 105 aaKnown RBP14.14□□□□□ -0.15
PNKP-204ENST00000594661 A0A1B0GVT2 93 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 H3BN98 237 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 WRBO00258 174 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 CASKO14936 926 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 KDM4BO94953 1096 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 EPPINO95925 133 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 HPP00738 406 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 PDGFBP01127 241 aaPredicted RBP14.14□□□□□ -0.15
PNKP-204ENST00000594661 ERVK-25P63136 954 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 HLXQ14774 488 aaPredicted RBP14.14□□□□□ -0.15
PNKP-204ENST00000594661 PRTGQ2VWP7 1150 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 CRTC2Q53ET0 693 aaPredicted RBP14.14□□□□□ -0.15
PNKP-204ENST00000594661 NKAIN2Q5VXU1 208 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 ELP5Q8TE02 316 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 C1GALT1C1Q96EU7 318 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 TGM7Q96PF1 710 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 DMRTA2Q96SC8 542 aa14.14□□□□□ -0.15
PNKP-204ENST00000594661 POLR2J3Q9H1A7 115 aaKnown RBP14.14□□□□□ -0.15
PNKP-204ENST00000594661 ZNF275Q9NSD4 429 aaPredicted RBP14.14□□□□□ -0.15
PNKP-204ENST00000594661 A0A1W2PRQ8 180 aa14.13□□□□□ -0.15
PNKP-204ENST00000594661 EFCAB7A8K855 629 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms