RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 CHP2O43745 196 aa12.92□□□□□ -0.34
VRK3-206ENST00000594090 FZD7O75084 574 aa12.92□□□□□ -0.34
VRK3-206ENST00000594090 AKR7A3O95154 331 aa12.92□□□□□ -0.34
VRK3-206ENST00000594090 EPXP11678 715 aa12.92□□□□□ -0.34
VRK3-206ENST00000594090 TNFRSF1BP20333 461 aa12.92□□□□□ -0.34
VRK3-206ENST00000594090 EDNRAP25101 427 aa12.92□□□□□ -0.34
VRK3-206ENST00000594090 OR3A2P47893 321 aa12.92□□□□□ -0.34
VRK3-206ENST00000594090 GALNT5Q7Z7M9 940 aa12.92□□□□□ -0.34
VRK3-206ENST00000594090 TSPYL5Q86VY4 417 aaPredicted RBP12.92□□□□□ -0.34
VRK3-206ENST00000594090 TMEM99Q8N816 258 aa12.92□□□□□ -0.34
VRK3-206ENST00000594090 CCDC197Q8NCU1 140 aa12.92□□□□□ -0.34
VRK3-206ENST00000594090 MFSD8Q8NHS3 518 aa12.92□□□□□ -0.34
VRK3-206ENST00000594090 ADAMTS16Q8TE57 1224 aa12.92□□□□□ -0.34
VRK3-206ENST00000594090 KTI12Q96EK9 354 aaPredicted RBP12.92□□□□□ -0.34
VRK3-206ENST00000594090 DACH2Q96NX9 599 aa12.92□□□□□ -0.34
VRK3-206ENST00000594090 KCTD14Q9BQ13 255 aaPredicted RBP12.92□□□□□ -0.34
VRK3-206ENST00000594090 KLHL4Q9C0H6 718 aa12.92□□□□□ -0.34
VRK3-206ENST00000594090 FANCFQ9NPI8 374 aa12.92□□□□□ -0.34
VRK3-206ENST00000594090 NDRG3Q9UGV2 375 aa12.92□□□□□ -0.34
VRK3-206ENST00000594090 NOSIPQ9Y314 301 aaKnown RBP12.92□□□□□ -0.34
VRK3-206ENST00000594090 SH3GLB1Q9Y371 365 aa12.92□□□□□ -0.34
VRK3-206ENST00000594090 CACNA1DQ01668 2161 aa12.91□□□□□ -0.34
VRK3-206ENST00000594090 TRAV36DV7A0A075B6V5 113 aa12.91□□□□□ -0.34
VRK3-206ENST00000594090 CXCR6O00574 342 aa12.91□□□□□ -0.34
VRK3-206ENST00000594090 GPR171O14626 319 aa12.91□□□□□ -0.34
VRK3-206ENST00000594090 P2RY4P51582 365 aa12.91□□□□□ -0.34
VRK3-206ENST00000594090 SLC17A1Q14916 467 aa12.91□□□□□ -0.34
VRK3-206ENST00000594090 FAM69AQ5T7M9 428 aa12.91□□□□□ -0.34
VRK3-206ENST00000594090 STAC2Q6ZMT1 411 aa12.91□□□□□ -0.34
VRK3-206ENST00000594090 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.91□□□□□ -0.34
VRK3-206ENST00000594090 P3H2Q8IVL5 708 aa12.91□□□□□ -0.34
VRK3-206ENST00000594090 PGAM4Q8N0Y7 254 aa12.91□□□□□ -0.34
VRK3-206ENST00000594090 GABRG1Q8N1C3 465 aa12.91□□□□□ -0.34
VRK3-206ENST00000594090 FITM2Q8N6M3 262 aa12.91□□□□□ -0.34
VRK3-206ENST00000594090 TPD52L3Q96J77 140 aa12.91□□□□□ -0.34
VRK3-206ENST00000594090 TMEM43Q9BTV4 400 aa12.91□□□□□ -0.34
VRK3-206ENST00000594090 PRSS50Q9UI38 385 aa12.91□□□□□ -0.34
VRK3-206ENST00000594090 FLVCR1Q9Y5Y0 555 aa12.91□□□□□ -0.34
VRK3-206ENST00000594090 DCHS2Q6V1P9 2916 aa12.91□□□□□ -0.34
VRK3-206ENST00000594090 TRAPPC13A5PLN9 417 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 A6NNC1 897 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 GSTA4O15217 222 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 OR2T1O43869 369 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 LYPD3O95274 346 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 THY1P04216 161 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 PSMB1P20618 241 aaKnown RBP12.9□□□□□ -0.34
VRK3-206ENST00000594090 PTNP21246 168 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 GTF2E2P29084 291 aaKnown RBP12.9□□□□□ -0.34
VRK3-206ENST00000594090 NTF4P34130 210 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 OR1E2P47887 323 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 KRTAP10-9P60411 292 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 SELENOWP63302 87 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 KRT72Q14CN4 511 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 DAZAP2Q15038 168 aaPredicted RBP12.9□□□□□ -0.34
VRK3-206ENST00000594090 LINC00114Q6XXX2 140 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 WDR88Q6ZMY6 472 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 TMEM200AQ86VY9 491 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 OR9K2Q8NGE7 335 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 TAAR8Q969N4 342 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 SLC25A36Q96CQ1 311 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 LURAP1Q96LR2 239 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 WFIKKN1Q96NZ8 548 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 EPYCQ99645 322 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 MED18Q9BUE0 208 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 SF3B5Q9BWJ5 86 aaKnown RBP12.9□□□□□ -0.34
VRK3-206ENST00000594090 ADA2Q9NZK5 511 aa12.9□□□□□ -0.34
VRK3-206ENST00000594090 FAM221AA4D161 298 aa12.89□□□□□ -0.35
VRK3-206ENST00000594090 CTAG2O75638 210 aa12.89□□□□□ -0.35
VRK3-206ENST00000594090 GGT1P19440 569 aa12.89□□□□□ -0.35
VRK3-206ENST00000594090 TMEM225Q6GV28 225 aa12.89□□□□□ -0.35
VRK3-206ENST00000594090 CASP12Q6UXS9 341 aa12.89□□□□□ -0.35
VRK3-206ENST00000594090 DEF8Q6ZN54 512 aa12.89□□□□□ -0.35
VRK3-206ENST00000594090 Q6ZT83 130 aa12.89□□□□□ -0.35
VRK3-206ENST00000594090 GPAT4Q86UL3 456 aa12.89□□□□□ -0.35
VRK3-206ENST00000594090 CXorf67Q86X51 503 aaPredicted RBP12.89□□□□□ -0.35
VRK3-206ENST00000594090 ZNF100Q8IYN0 542 aa12.89□□□□□ -0.35
VRK3-206ENST00000594090 OR6S1Q8NH40 331 aa12.89□□□□□ -0.35
VRK3-206ENST00000594090 LZICQ8WZA0 190 aa12.89□□□□□ -0.35
VRK3-206ENST00000594090 APH1AQ96BI3 265 aa12.89□□□□□ -0.35
VRK3-206ENST00000594090 C6orf203Q9P0P8 240 aaPredicted RBP12.89□□□□□ -0.35
VRK3-206ENST00000594090 SEC14L4Q9UDX3 406 aa12.89□□□□□ -0.35
VRK3-206ENST00000594090 SLC7A7Q9UM01 511 aa12.89□□□□□ -0.35
VRK3-206ENST00000594090 RASD1Q9Y272 281 aa12.89□□□□□ -0.35
VRK3-206ENST00000594090 M0R082 166 aa12.88□□□□□ -0.35
VRK3-206ENST00000594090 MRPL33O75394 65 aaKnown RBP12.88□□□□□ -0.35
VRK3-206ENST00000594090 VAMP5O95183 116 aa12.88□□□□□ -0.35
VRK3-206ENST00000594090 GOSR1O95249 250 aa12.88□□□□□ -0.35
VRK3-206ENST00000594090 CNOT4O95628 575 aaKnown RBP12.88□□□□□ -0.35
VRK3-206ENST00000594090 ADAP00813 363 aa12.88□□□□□ -0.35
VRK3-206ENST00000594090 BGLAPP02818 100 aa12.88□□□□□ -0.35
VRK3-206ENST00000594090 NCK1P16333 377 aa12.88□□□□□ -0.35
VRK3-206ENST00000594090 GRPRP30550 384 aa12.88□□□□□ -0.35
VRK3-206ENST00000594090 TAS2R41P59536 307 aa12.88□□□□□ -0.35
VRK3-206ENST00000594090 SLC25A3Q00325 362 aa12.88□□□□□ -0.35
VRK3-206ENST00000594090 POU4F3Q15319 338 aa12.88□□□□□ -0.35
VRK3-206ENST00000594090 ANKRD34AQ69YU3 496 aa12.88□□□□□ -0.35
VRK3-206ENST00000594090 CBLL1Q75N03 491 aa12.88□□□□□ -0.35
VRK3-206ENST00000594090 VTCN1Q7Z7D3 282 aa12.88□□□□□ -0.35
VRK3-206ENST00000594090 RNF148Q8N7C7 305 aa12.88□□□□□ -0.35
VRK3-206ENST00000594090 ZNF417Q8TAU3 575 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms