RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 QPRTQ15274 297 aa12□□□□□ -0.49
VRK3-205ENST00000593919 INPP5JQ15735 1006 aaPredicted RBP12□□□□□ -0.49
VRK3-205ENST00000593919 SNAPC1Q16533 368 aa12□□□□□ -0.49
VRK3-205ENST00000593919 OCLNQ16625 522 aa12□□□□□ -0.49
VRK3-205ENST00000593919 ELOA3BQ3SY89 546 aa12□□□□□ -0.49
VRK3-205ENST00000593919 MEDAGQ5VYS4 303 aa12□□□□□ -0.49
VRK3-205ENST00000593919 JMJD6Q6NYC1 403 aaPredicted RBP12□□□□□ -0.49
VRK3-205ENST00000593919 TMEM81Q6P7N7 255 aa12□□□□□ -0.49
VRK3-205ENST00000593919 Q6ZNX1 250 aa12□□□□□ -0.49
VRK3-205ENST00000593919 RASSF6Q6ZTQ3 369 aa12□□□□□ -0.49
VRK3-205ENST00000593919 USP43Q70EL4 1123 aa12□□□□□ -0.49
VRK3-205ENST00000593919 ELOA3Q8NG57 546 aa12□□□□□ -0.49
VRK3-205ENST00000593919 OR6Q1Q8NGQ2 317 aa12□□□□□ -0.49
VRK3-205ENST00000593919 MCFD2Q8NI22 146 aa12□□□□□ -0.49
VRK3-205ENST00000593919 PAQR8Q8TEZ7 354 aa12□□□□□ -0.49
VRK3-205ENST00000593919 S100ZQ8WXG8 99 aa12□□□□□ -0.49
VRK3-205ENST00000593919 NXPE2Q96DL1 559 aa12□□□□□ -0.49
VRK3-205ENST00000593919 TMEM80Q96HE8 168 aa12□□□□□ -0.49
VRK3-205ENST00000593919 SECISBP2Q96T21 854 aaKnown RBP12□□□□□ -0.49
VRK3-205ENST00000593919 ADAM19Q9H013 955 aa12□□□□□ -0.49
VRK3-205ENST00000593919 SH2D2AQ9NP31 389 aa12□□□□□ -0.49
VRK3-205ENST00000593919 MED11Q9P086 117 aa12□□□□□ -0.49
VRK3-205ENST00000593919 CLEC2DQ9UHP7 191 aa12□□□□□ -0.49
VRK3-205ENST00000593919 KLK13Q9UKR3 277 aa12□□□□□ -0.49
VRK3-205ENST00000593919 IGKV1D-42A0A075B6H8 117 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 ANKUB1A6NFN9 424 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 PNMTP11086 282 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 SUMO3P55854 103 aaPredicted RBP11.99□□□□□ -0.49
VRK3-205ENST00000593919 SNTA1Q13424 505 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 INAQ16352 499 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 ZNF620Q6ZNG0 422 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 JAZF1Q86VZ6 243 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 BEST3Q8N1M1 668 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 CLEC1AQ8NC01 280 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 OR8D4Q8NGM9 314 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 LRR1Q96L50 414 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 FER1L6-AS2Q96M78 137 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 CENPOQ9BU64 300 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 CPNE5Q9HCH3 593 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 RHBDL2Q9NX52 303 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 TAS2R10Q9NYW0 307 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 TMEM5Q9Y2B1 443 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 IGLV3-32A0A0A0MS00 114 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 SAGP10523 405 aaPredicted RBP11.99□□□□□ -0.49
VRK3-205ENST00000593919 GP1BBP13224 206 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 WT1P19544 449 aaPredicted RBP11.99□□□□□ -0.49
VRK3-205ENST00000593919 RPS3AP61247 264 aaKnown RBP11.99□□□□□ -0.49
VRK3-205ENST00000593919 TUBA1BP68363 451 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 FOXC1Q12948 553 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 SYT14P1Q58G82 188 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 CLEC12AQ5QGZ9 265 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 SLC22A10Q63ZE4 541 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 POMZP3Q6PJE2 187 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 ARSKQ6UWY0 536 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 TMPRSS11FQ6ZWK6 438 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 TUBA1AQ71U36 451 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 MDGA2Q7Z553 956 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 CDK20Q8IZL9 346 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 CYP4Z2PQ8N1L4 340 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 CENPSQ8N2Z9 138 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 MFSD4AQ8N468 514 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 FAM26EQ8N5C1 309 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 KBTBD8Q8NFY9 601 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 FRMD6Q96NE9 622 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 ZNF582Q96NG8 517 aaPredicted RBP11.99□□□□□ -0.49
VRK3-205ENST00000593919 OPALINQ96PE5 141 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 CCNL2Q96S94 520 aaPredicted RBP11.99□□□□□ -0.49
VRK3-205ENST00000593919 C12orf10Q9HB07 376 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 SDHAF3Q9NRP4 125 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 FBXO9Q9UK97 447 aaPredicted RBP11.99□□□□□ -0.49
VRK3-205ENST00000593919 ZMIZ1Q9ULJ6 1067 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 ERGIC3Q9Y282 383 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 GPR52Q9Y2T5 361 aa11.99□□□□□ -0.49
VRK3-205ENST00000593919 CCRL2O00421 344 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 PRKAR1AP10644 381 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 ZNF12P17014 697 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 EGR4Q05215 589 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 CLN3Q13286 438 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 SSX1Q16384 188 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 SLC30A6Q6NXT4 461 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 SLC27A4Q6P1M0 643 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 PAQR6Q6TCH4 344 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 DCDC5Q6ZRR9 648 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 SNX29P2Q8IUI4 249 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 OR13C2Q8NGS9 318 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 SGCZQ96LD1 299 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 NPAS1Q99742 590 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 TMEM43Q9BTV4 400 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 SLC19A3Q9BZV2 496 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 PROK2Q9HC23 129 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 IL20Q9NYY1 176 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 STMN3Q9NZ72 180 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 IL20RAQ9UHF4 553 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 TEKT2Q9UIF3 430 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 VDAC3Q9Y277 283 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 B3GNT3Q9Y2A9 372 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 NCKAP5O14513 1909 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 UNC119BA6NIH7 251 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 METTL15A6NJ78 407 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 NKX2-8O15522 239 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms