RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 TMCO6Q96DC7 493 aa6.74□□□□□ -1.33
VMP1-213ENST00000591877 METTL2AQ96IZ6 378 aaKnown RBP6.74□□□□□ -1.33
VMP1-213ENST00000591877 TUBA1CQ9BQE3 449 aa6.74□□□□□ -1.33
VMP1-213ENST00000591877 LMF2Q9BU23 707 aaKnown RBP6.74□□□□□ -1.33
VMP1-213ENST00000591877 STMN4Q9H169 189 aaPredicted RBP6.74□□□□□ -1.33
VMP1-213ENST00000591877 VIPAS39Q9H9C1 493 aa6.74□□□□□ -1.33
VMP1-213ENST00000591877 LRTM1Q9HBL6 345 aa6.74□□□□□ -1.33
VMP1-213ENST00000591877 MIEF1Q9NQG6 463 aa6.74□□□□□ -1.33
VMP1-213ENST00000591877 GIMAP4Q9NUV9 329 aa6.74□□□□□ -1.33
VMP1-213ENST00000591877 C1orf109Q9NX04 203 aa6.74□□□□□ -1.33
VMP1-213ENST00000591877 TAS2R9Q9NYW1 312 aa6.74□□□□□ -1.33
VMP1-213ENST00000591877 KCNN3Q9UGI6 736 aa6.74□□□□□ -1.33
VMP1-213ENST00000591877 FIS1Q9Y3D6 152 aa6.74□□□□□ -1.33
VMP1-213ENST00000591877 MED13LQ71F56 2210 aa6.74□□□□□ -1.33
VMP1-213ENST00000591877 AKAP6Q13023 2319 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 ITPR3Q14573 2671 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 SLC28A1O00337 649 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 LSM1O15116 133 aaKnown RBP6.73□□□□□ -1.33
VMP1-213ENST00000591877 TBX19O60806 448 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 SPAG7O75391 227 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 CRCPO75575 148 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 IGKV1D-16P01601 117 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 FGF4P08620 206 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 IFI6P09912 130 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 LINC00032P0C843 101 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 IL12BP29460 328 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 FRKP42685 505 aaPredicted RBP6.73□□□□□ -1.33
VMP1-213ENST00000591877 ASCL1P50553 236 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 CLDN15P56746 228 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 CLDN18P56856 261 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 SRYQ05066 204 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 ZNF155Q12901 538 aaPredicted RBP6.73□□□□□ -1.33
VMP1-213ENST00000591877 PDE7AQ13946 482 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 CASP8Q14790 479 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 FBXL19-AS1Q494R0 122 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 RNASE12Q5GAN4 147 aaKnown RBP6.73□□□□□ -1.33
VMP1-213ENST00000591877 ARL13AQ5H913 290 aaPredicted RBP6.73□□□□□ -1.33
VMP1-213ENST00000591877 SH2D4BQ5SQS7 431 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 CES4AQ5XG92 561 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 ARSKQ6UWY0 536 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 APOOLQ6UXV4 268 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 ZCCHC23Q6ZST2 131 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 IKBIPQ70UQ0 350 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 MREGQ8N565 214 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 FADS6Q8N9I5 356 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 OR14L1PQ8NHC6 308 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 CLHC1Q8NHS4 586 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 TCP10LQ8TDR4 215 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 CIDECQ96AQ7 238 aaPredicted RBP6.73□□□□□ -1.33
VMP1-213ENST00000591877 FAM120BQ96EK7 910 aaKnown RBP6.73□□□□□ -1.33
VMP1-213ENST00000591877 GIMAP5Q96F15 307 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 ZNF764Q96H86 408 aaPredicted RBP6.73□□□□□ -1.33
VMP1-213ENST00000591877 C3orf30Q96M34 536 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 TSSK3Q96PN8 268 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 FAM111AQ96PZ2 611 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 CCT7Q99832 543 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 ZNF559Q9BR84 538 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 TRMOQ9BU70 441 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 CALHM2Q9HA72 323 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 SENP1Q9P0U3 644 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 CLCF1Q9UBD9 225 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 ZNF629Q9UEG4 869 aaPredicted RBP6.73□□□□□ -1.33
VMP1-213ENST00000591877 GIMAP2Q9UG22 337 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 BAIAP2L1Q9UHR4 511 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 LGALS13Q9UHV8 139 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 WBP11Q9Y2W2 641 aaKnown RBP6.73□□□□□ -1.33
VMP1-213ENST00000591877 MRPS18CQ9Y3D5 142 aaKnown RBP6.73□□□□□ -1.33
VMP1-213ENST00000591877 OR10H1Q9Y4A9 318 aa6.73□□□□□ -1.33
VMP1-213ENST00000591877 TMEM247A6NEH6 219 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 MCIDASD6RGH6 385 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 PRYO14603 147 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 RGS14O43566 566 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 HCRTR2O43614 444 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 SCO2O43819 266 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 TYROBPO43914 113 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 CTAG2O75638 210 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 NKX2-2O95096 273 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 TGM6O95932 706 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 ALDOCP09972 364 aaKnown RBP6.72□□□□□ -1.33
VMP1-213ENST00000591877 ACP2P11117 423 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 BCKDHAP12694 445 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 ZNF708P17019 499 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 EFNA1P20827 205 aaPredicted RBP6.72□□□□□ -1.33
VMP1-213ENST00000591877 TCEA1P23193 301 aaKnown RBP6.72□□□□□ -1.33
VMP1-213ENST00000591877 DPP4P27487 766 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 NTSP30990 170 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 EVI2BP34910 448 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 KRT20P35900 424 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 RPL38P63173 70 aaKnown RBP6.72□□□□□ -1.33
VMP1-213ENST00000591877 PSPHP78330 225 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 EFNB1P98172 346 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 EPS8Q12929 822 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 HSPB3Q12988 150 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 MYBPHQ13203 477 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 FOXE3Q13461 319 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 SF3B4Q15427 424 aaKnown RBP eCLIP6.72□□□□□ -1.335e-12■■■■■ 49.6
VMP1-213ENST00000591877 XKR7Q5GH72 579 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 MARCH3Q86UD3 253 aa6.72□□□□□ -1.33
VMP1-213ENST00000591877 EXOC3L1Q86VI1 746 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms