RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 AKR7A3O95154 331 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 CECR9P0C854 216 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 LYNX1P0DP58 116 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 EGR1P18146 543 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 TACR3P29371 465 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 SLC1A3P43003 542 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 POLR2HP52434 150 aaKnown RBP13.8□□□□□ -0.2
DDX39A-216ENST00000591275 UBE2NP61088 152 aaKnown RBP13.8□□□□□ -0.2
DDX39A-216ENST00000591275 ACTG1P63261 375 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 KCNJ10P78508 379 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 FUT5Q11128 374 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 C1QTNF12Q5T7M4 302 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 ATAD3BQ5T9A4 648 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 OR4F3Q6IEY1 312 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 ANKRD16Q6P6B7 361 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 PAQR6Q6TCH4 344 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 FRRS1Q6ZNA5 592 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 GPAT4Q86UL3 456 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 SVOPLQ8N434 492 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 SEMA6DQ8NFY4 1073 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 OR9K2Q8NGE7 335 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 ROPN1LQ96C74 230 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 METTL17Q9H7H0 456 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-216ENST00000591275 OBP2BQ9NPH6 170 aa13.8□□□□□ -0.2
DDX39A-216ENST00000591275 ZNF208O43345 1280 aa13.79□□□□□ -0.2
DDX39A-216ENST00000591275 SHBGP04278 402 aa13.79□□□□□ -0.2
DDX39A-216ENST00000591275 G6PDP11413 515 aa13.79□□□□□ -0.2
DDX39A-216ENST00000591275 IFNGR1P15260 489 aa13.79□□□□□ -0.2
DDX39A-216ENST00000591275 KRT4P19013 534 aa13.79□□□□□ -0.2
DDX39A-216ENST00000591275 THBS4P35443 961 aa13.79□□□□□ -0.2
DDX39A-216ENST00000591275 HTR3AP46098 478 aa13.79□□□□□ -0.2
DDX39A-216ENST00000591275 CBX1P83916 185 aa13.79□□□□□ -0.2
DDX39A-216ENST00000591275 CEACAM7Q14002 265 aa13.79□□□□□ -0.2
DDX39A-216ENST00000591275 OR7A5Q15622 319 aa13.79□□□□□ -0.2
DDX39A-216ENST00000591275 SPATA21Q7Z572 469 aa13.79□□□□□ -0.2
DDX39A-216ENST00000591275 ABHD12BQ7Z5M8 362 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-216ENST00000591275 ZNF786Q8N393 782 aa13.79□□□□□ -0.2
DDX39A-216ENST00000591275 OR4A15Q8NGL6 344 aa13.79□□□□□ -0.2
DDX39A-216ENST00000591275 NEU4Q8WWR8 484 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-216ENST00000591275 PMM1Q92871 262 aa13.79□□□□□ -0.2
DDX39A-216ENST00000591275 ALKBH3Q96Q83 286 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-216ENST00000591275 TMEM109Q9BVC6 243 aa13.79□□□□□ -0.2
DDX39A-216ENST00000591275 EXOSC3Q9NQT5 275 aaKnown RBP13.79□□□□□ -0.2
DDX39A-216ENST00000591275 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-216ENST00000591275 MID2Q9UJV3 735 aa13.79□□□□□ -0.2
DDX39A-216ENST00000591275 ZNF587BE7ETH6 402 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 ERCC1P07992 297 aaPredicted RBP13.78□□□□□ -0.2
DDX39A-216ENST00000591275 CELA3BP08861 270 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 NUDT17P0C025 328 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 ALDH3A1P30838 453 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 DVL1P1P54792 670 aaPredicted RBP13.78□□□□□ -0.2
DDX39A-216ENST00000591275 HGFACQ04756 655 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 RIN1Q13671 783 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 ADRM1Q16186 407 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 GPAT3Q53EU6 434 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 ZCCHC23Q6ZST2 131 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 LINGO2Q7L985 606 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 MYPOPQ86VE0 399 aaPredicted RBP13.78□□□□□ -0.2
DDX39A-216ENST00000591275 ANKRD46Q86W74 232 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 C3orf56Q8N813 242 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 OR4F15Q8NGB8 312 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 MIPOL1Q8TD10 442 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 WDR60Q8WVS4 1066 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 BCL2L2Q92843 193 aaPredicted RBP13.78□□□□□ -0.2
DDX39A-216ENST00000591275 BOD1Q96IK1 185 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 DOK1Q99704 481 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 MECRQ9BV79 373 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 SAP130Q9H0E3 1048 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 DYNLRB1Q9NP97 96 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 POLE3Q9NRF9 147 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 PCDHB14Q9Y5E9 798 aa13.78□□□□□ -0.2
DDX39A-216ENST00000591275 LIPT2A6NK58 231 aa13.77□□□□□ -0.21
DDX39A-216ENST00000591275 NPHS1O60500 1241 aa13.77□□□□□ -0.21
DDX39A-216ENST00000591275 SCN2BO60939 215 aa13.77□□□□□ -0.21
DDX39A-216ENST00000591275 CPSF4O95639 269 aaKnown RBP13.77□□□□□ -0.21
DDX39A-216ENST00000591275 AGR2O95994 175 aa13.77□□□□□ -0.21
DDX39A-216ENST00000591275 IGLV1-44P01699 117 aa13.77□□□□□ -0.21
DDX39A-216ENST00000591275 GPIP06744 558 aa13.77□□□□□ -0.21
DDX39A-216ENST00000591275 NPR2P20594 1047 aa13.77□□□□□ -0.21
DDX39A-216ENST00000591275 SELENOPP49908 381 aa13.77□□□□□ -0.21
DDX39A-216ENST00000591275 AP1ARQ63HQ0 302 aa13.77□□□□□ -0.21
DDX39A-216ENST00000591275 GSPT2Q8IYD1 628 aaKnown RBP13.77□□□□□ -0.21
DDX39A-216ENST00000591275 CDK20Q8IZL9 346 aa13.77□□□□□ -0.21
DDX39A-216ENST00000591275 CNPY4Q8N129 248 aa13.77□□□□□ -0.21
DDX39A-216ENST00000591275 UBASH3BQ8TF42 649 aa13.77□□□□□ -0.21
DDX39A-216ENST00000591275 OIT3Q8WWZ8 545 aa13.77□□□□□ -0.21
DDX39A-216ENST00000591275 TUBGCP3Q96CW5 907 aa13.77□□□□□ -0.21
DDX39A-216ENST00000591275 SF3B5Q9BWJ5 86 aaKnown RBP13.77□□□□□ -0.21
DDX39A-216ENST00000591275 TPK1Q9H3S4 243 aa13.77□□□□□ -0.21
DDX39A-216ENST00000591275 NARFLQ9H6Q4 476 aa13.77□□□□□ -0.21
DDX39A-216ENST00000591275 LPAR2Q9HBW0 351 aa13.77□□□□□ -0.21
DDX39A-216ENST00000591275 ADPRHL2Q9NX46 363 aa13.77□□□□□ -0.21
DDX39A-216ENST00000591275 CRNNQ9UBG3 495 aaPredicted RBP13.77□□□□□ -0.21
DDX39A-216ENST00000591275 ARPC4-TTLL3A0A0A6YYG9 625 aa13.76□□□□□ -0.21
DDX39A-216ENST00000591275 A0A0A6YYJ9 748 aa13.76□□□□□ -0.21
DDX39A-216ENST00000591275 TMEM129A0AVI4 362 aa13.76□□□□□ -0.21
DDX39A-216ENST00000591275 PRAMEF27A3QJZ7 478 aa13.76□□□□□ -0.21
DDX39A-216ENST00000591275 AQP7P3A6NL99 342 aa13.76□□□□□ -0.21
DDX39A-216ENST00000591275 SLCO1B7G3V0H7 640 aa13.76□□□□□ -0.21
DDX39A-216ENST00000591275 UPK3AO75631 287 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms