RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 SERINC1Q9NRX5 453 aa16.01■□□□□ 0.15
VAT1-208ENST00000590924 DCAF13Q9NV06 445 aaKnown RBP16.01■□□□□ 0.15
VAT1-208ENST00000590924 ACTR3BQ9P1U1 418 aa16.01■□□□□ 0.15
VAT1-208ENST00000590924 TESQ9UGI8 421 aaKnown RBP16.01■□□□□ 0.15
VAT1-208ENST00000590924 EMC9Q9Y3B6 208 aa16.01■□□□□ 0.15
VAT1-208ENST00000590924 ARHGEF9O43307 516 aa16■□□□□ 0.15
VAT1-208ENST00000590924 INHBBP09529 407 aa16■□□□□ 0.15
VAT1-208ENST00000590924 PRG2P13727 222 aa16■□□□□ 0.15
VAT1-208ENST00000590924 FPR1P21462 350 aa16■□□□□ 0.15
VAT1-208ENST00000590924 RGS8P57771 180 aaPredicted RBP16■□□□□ 0.15
VAT1-208ENST00000590924 GABPB1Q06547 395 aaPredicted RBP16■□□□□ 0.15
VAT1-208ENST00000590924 TRAP1Q12931 704 aaKnown RBP16■□□□□ 0.15
VAT1-208ENST00000590924 FOXF1Q12946 379 aa16■□□□□ 0.15
VAT1-208ENST00000590924 MTX3Q5HYI7 312 aa16■□□□□ 0.15
VAT1-208ENST00000590924 PLEKHM3Q6ZWE6 761 aa16■□□□□ 0.15
VAT1-208ENST00000590924 COMTD1Q86VU5 262 aa16■□□□□ 0.15
VAT1-208ENST00000590924 OR10D3Q8NH80 312 aa16■□□□□ 0.15
VAT1-208ENST00000590924 ZNF524Q96C55 264 aa16■□□□□ 0.15
VAT1-208ENST00000590924 NPAS1Q99742 590 aa16■□□□□ 0.15
VAT1-208ENST00000590924 PRRG4Q9BZD6 226 aa16■□□□□ 0.15
VAT1-208ENST00000590924 POLR2J2Q9GZM3 115 aaKnown RBP16■□□□□ 0.15
VAT1-208ENST00000590924 PCDHAC1Q9H158 963 aa16■□□□□ 0.15
VAT1-208ENST00000590924 POLR2J3Q9H1A7 115 aaKnown RBP16■□□□□ 0.15
VAT1-208ENST00000590924 C12orf10Q9HB07 376 aa16■□□□□ 0.15
VAT1-208ENST00000590924 PLSCR4Q9NRQ2 329 aa16■□□□□ 0.15
VAT1-208ENST00000590924 SAMD4AQ9UPU9 718 aaKnown RBP16■□□□□ 0.15
VAT1-208ENST00000590924 GJE1A6NN92 205 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 ARPC2O15144 300 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 ADAMDEC1O15204 470 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 SS18L1O75177 396 aaPredicted RBP15.99■□□□□ 0.15
VAT1-208ENST00000590924 SERPINA1P01009 418 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 NCK1P16333 377 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 IL11P20809 199 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 LOXP28300 417 aaPredicted RBP15.99■□□□□ 0.15
VAT1-208ENST00000590924 MSX2P35548 267 aaPredicted RBP15.99■□□□□ 0.15
VAT1-208ENST00000590924 CLK1P49759 484 aaKnown RBP15.99■□□□□ 0.15
VAT1-208ENST00000590924 POLR2HP52434 150 aaKnown RBP15.99■□□□□ 0.15
VAT1-208ENST00000590924 MERTKQ12866 999 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 ACKR1Q16570 336 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 Q5PR19 223 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 C20orf204Q6ZNR8 217 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 ESPNLQ6ZVH7 1005 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 DNAJA4Q8WW22 397 aaPredicted RBP15.99■□□□□ 0.15
VAT1-208ENST00000590924 ASB9Q96DX5 294 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 ZC3HAV1LQ96H79 300 aaKnown RBP15.99■□□□□ 0.15
VAT1-208ENST00000590924 NSMCE2Q96MF7 247 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 HS3ST6Q96QI5 342 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 KLHL4Q9C0H6 718 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 LRMDAQ9H2I8 198 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 UBTD1Q9HAC8 227 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 TMEM27Q9HBJ8 222 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 GLRX2Q9NS18 164 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 MCTS1Q9ULC4 181 aaKnown RBP15.99■□□□□ 0.15
VAT1-208ENST00000590924 SH3GLB1Q9Y371 365 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 SPIN1Q9Y657 262 aaPredicted RBP15.99■□□□□ 0.15
VAT1-208ENST00000590924 USF3Q68DE3 2245 aa15.99■□□□□ 0.15
VAT1-208ENST00000590924 FRS3O43559 492 aa15.98■□□□□ 0.15
VAT1-208ENST00000590924 EFNA2O43921 213 aa15.98■□□□□ 0.15
VAT1-208ENST00000590924 SMPD2O60906 423 aa15.98■□□□□ 0.15
VAT1-208ENST00000590924 PLGP00747 810 aaPredicted RBP15.98■□□□□ 0.15
VAT1-208ENST00000590924 PPP3CBP16298 524 aa15.98■□□□□ 0.15
VAT1-208ENST00000590924 CTBP2P56545 445 aa15.98■□□□□ 0.15
VAT1-208ENST00000590924 NCALDP61601 193 aa15.98■□□□□ 0.15
VAT1-208ENST00000590924 SELENBP1Q13228 472 aa15.98■□□□□ 0.15
VAT1-208ENST00000590924 PPP4R4Q6NUP7 873 aa15.98■□□□□ 0.15
VAT1-208ENST00000590924 C22orf34Q6ZV56 151 aa15.98■□□□□ 0.15
VAT1-208ENST00000590924 ADGRG3Q86Y34 549 aa15.98■□□□□ 0.15
VAT1-208ENST00000590924 P3H2Q8IVL5 708 aa15.98■□□□□ 0.15
VAT1-208ENST00000590924 OR6T1Q8NGN1 323 aa15.98■□□□□ 0.15
VAT1-208ENST00000590924 OR2V1Q8NHB1 315 aa15.98■□□□□ 0.15
VAT1-208ENST00000590924 SLC25A43Q8WUT9 341 aaPredicted RBP15.98■□□□□ 0.15
VAT1-208ENST00000590924 MCUR1Q96AQ8 359 aa15.98■□□□□ 0.15
VAT1-208ENST00000590924 TPD52L3Q96J77 140 aa15.98■□□□□ 0.15
VAT1-208ENST00000590924 CCL19Q99731 98 aa15.98■□□□□ 0.15
VAT1-208ENST00000590924 SMR3AQ99954 134 aa15.98■□□□□ 0.15
VAT1-208ENST00000590924 CADM1Q9BY67 442 aaKnown RBP15.98■□□□□ 0.15
VAT1-208ENST00000590924 RPS6KB2Q9UBS0 482 aa15.98■□□□□ 0.15
VAT1-208ENST00000590924 ABCA2Q9BZC7 2435 aa15.98■□□□□ 0.15
VAT1-208ENST00000590924 TLN2Q9Y4G6 2542 aa15.98■□□□□ 0.15
VAT1-208ENST00000590924 FN1P02751 2386 aaKnown RBP15.98■□□□□ 0.15
VAT1-208ENST00000590924 TNFSF11O14788 317 aa15.97■□□□□ 0.15
VAT1-208ENST00000590924 ZNF208O43345 1280 aa15.97■□□□□ 0.15
VAT1-208ENST00000590924 CXCL13O43927 109 aa15.97■□□□□ 0.15
VAT1-208ENST00000590924 TPST2O60704 377 aa15.97■□□□□ 0.15
VAT1-208ENST00000590924 SYNGR4O95473 234 aa15.97■□□□□ 0.15
VAT1-208ENST00000590924 STAMBPO95630 424 aa15.97■□□□□ 0.15
VAT1-208ENST00000590924 ZNF682O95780 498 aa15.97■□□□□ 0.15
VAT1-208ENST00000590924 TACR3P29371 465 aa15.97■□□□□ 0.15
VAT1-208ENST00000590924 LTBQ06643 244 aa15.97■□□□□ 0.15
VAT1-208ENST00000590924 EXOC3L2Q2M3D2 409 aa15.97■□□□□ 0.15
VAT1-208ENST00000590924 IFI44LQ53G44 452 aa15.97■□□□□ 0.15
VAT1-208ENST00000590924 SWT1Q5T5J6 900 aaKnown RBP15.97■□□□□ 0.15
VAT1-208ENST00000590924 ANKRD34AQ69YU3 496 aa15.97■□□□□ 0.15
VAT1-208ENST00000590924 LCN8Q6JVE9 175 aa15.97■□□□□ 0.15
VAT1-208ENST00000590924 C3orf33Q6P1S2 294 aa15.97■□□□□ 0.15
VAT1-208ENST00000590924 ZNF613Q6PF04 617 aa15.97■□□□□ 0.15
VAT1-208ENST00000590924 ULK3Q6PHR2 472 aa15.97■□□□□ 0.15
VAT1-208ENST00000590924 PRSS57Q6UWY2 283 aa15.97■□□□□ 0.15
VAT1-208ENST00000590924 STAC2Q6ZMT1 411 aa15.97■□□□□ 0.15
VAT1-208ENST00000590924 YTHDF3Q7Z739 585 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms