RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 EGFL7Q9UHF1 273 aa5.43□□□□□ -1.54
DNMT1-222ENST00000590619 GRID1Q9ULK0 1009 aa5.43□□□□□ -1.54
DNMT1-222ENST00000590619 TRAPPC4Q9Y296 219 aa5.43□□□□□ -1.54
DNMT1-222ENST00000590619 HDGFL3Q9Y3E1 203 aa5.43□□□□□ -1.54
DNMT1-222ENST00000590619 LYSTQ99698 3801 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 ZNF816-ZNF321PA0A0X1KG74 233 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 GNG14A0A1W2PPG7 69 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 FAM187AA6NFU0 413 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 SYCE1LA8MT33 242 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 H3BNH8 94 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 ZNF264O43296 627 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 DNPH1O43598 174 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 XPNPEP2O43895 674 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 PCDH7O60245 1069 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 GPR137BO60478 399 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 KRT33AO76009 404 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 RSL1D1O76021 490 aaKnown RBP5.42□□□□□ -1.54
DNMT1-222ENST00000590619 CLPTM1O96005 669 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 IMPDH2P12268 514 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 BCKDHAP12694 445 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 GFAPP14136 432 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 DDCP20711 480 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 ATP12AP54707 1039 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 SEC61A1P61619 476 aaKnown RBP5.42□□□□□ -1.54
DNMT1-222ENST00000590619 ARF1P84077 181 aaKnown RBP5.42□□□□□ -1.54
DNMT1-222ENST00000590619 PAX2Q02962 417 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 DBPQ10586 325 aaPredicted RBP5.42□□□□□ -1.54
DNMT1-222ENST00000590619 TRAF3Q13114 568 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 HNRNPA0Q13151 305 aaKnown RBP5.42□□□□□ -1.54
DNMT1-222ENST00000590619 CBFBQ13951 182 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 VPS26BQ4G0F5 336 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 EXOSC6Q5RKV6 272 aaKnown RBP5.42□□□□□ -1.54
DNMT1-222ENST00000590619 MDP1Q86V88 176 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 ANKMY2Q8IV38 441 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 POU5F2Q8N7G0 328 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 RHEBL1Q8TAI7 183 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 SLC25A43Q8WUT9 341 aaPredicted RBP5.42□□□□□ -1.54
DNMT1-222ENST00000590619 ST8SIA1Q92185 356 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 CCL17Q92583 94 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 RBMXL1Q96E39 390 aaKnown RBP5.42□□□□□ -1.54
DNMT1-222ENST00000590619 TIMD4Q96H15 378 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 FAM71F1Q96KD3 344 aaPredicted RBP5.42□□□□□ -1.54
DNMT1-222ENST00000590619 ZNF75AQ96N20 296 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 TSPAN32Q96QS1 320 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 GPR22Q99680 433 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 NAA11Q9BSU3 229 aaPredicted RBP5.42□□□□□ -1.54
DNMT1-222ENST00000590619 CCDC106Q9BWC9 280 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 TRIM5Q9C035 493 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 OR11A1Q9GZK7 315 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 HOXD1Q9GZZ0 328 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 NPHS2Q9NP85 383 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 CTPS2Q9NRF8 586 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 ACER3Q9NUN7 267 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 B3GNT2Q9NY97 397 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 GRHL1Q9NZI5 618 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 TMEM181Q9P2C4 612 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 ZNF346Q9UL40 294 aaKnown RBP5.42□□□□□ -1.54
DNMT1-222ENST00000590619 DTNAQ9Y4J8 743 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 TNPO3Q9Y5L0 923 aaKnown RBP5.42□□□□□ -1.54
DNMT1-222ENST00000590619 NOX1Q9Y5S8 564 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 POMT1Q9Y6A1 747 aa5.42□□□□□ -1.54
DNMT1-222ENST00000590619 A0A096LPK6 155 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 A0A1W2PPW3 197 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 ISPDA4D126 451 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 ZNF587BE7ETH6 402 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 NPIPB9F8W1W9 429 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 DNALI1O14645 258 aaPredicted RBP5.41□□□□□ -1.54
DNMT1-222ENST00000590619 EIF1BO60739 113 aaKnown RBP5.41□□□□□ -1.54
DNMT1-222ENST00000590619 TSPAN9O75954 239 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 ZNF432O94892 652 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 HSPA4LO95757 839 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 IFI6P09912 130 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 ALOX5P09917 674 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 SBK2P0C263 348 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 CCNA2P20248 432 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 MAKP20794 623 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 CXCR5P32302 372 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 APOBEC1P41238 236 aaKnown RBP5.41□□□□□ -1.54
DNMT1-222ENST00000590619 CLK1P49759 484 aaKnown RBP5.41□□□□□ -1.54
DNMT1-222ENST00000590619 SELENOPP49908 381 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 KRTAP10-11P60412 298 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 SLC35A1P78382 337 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 POU6F2P78424 691 aaPredicted RBP5.41□□□□□ -1.54
DNMT1-222ENST00000590619 EGR3Q06889 387 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 HERPUD1Q15011 391 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 TSTQ16762 297 aaKnown RBP5.41□□□□□ -1.54
DNMT1-222ENST00000590619 PCGF3Q3KNV8 242 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 GGTA1PQ4G0N0 100 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 GKAP1Q5VSY0 366 aaPredicted RBP5.41□□□□□ -1.54
DNMT1-222ENST00000590619 FAM71E1Q6IPT2 247 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 LETMD1Q6P1Q0 360 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 METTL2BQ6P1Q9 378 aaKnown RBP5.41□□□□□ -1.54
DNMT1-222ENST00000590619 TMEM154Q6P9G4 183 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 CCDC137Q6PK04 289 aaKnown RBP5.41□□□□□ -1.54
DNMT1-222ENST00000590619 RAPH1Q70E73 1250 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 RPS27LQ71UM5 84 aaKnown RBP5.41□□□□□ -1.54
DNMT1-222ENST00000590619 CMC1Q7Z7K0 106 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 C1orf174Q8IYL3 243 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 ZBED8Q8IZ13 594 aa5.41□□□□□ -1.54
DNMT1-222ENST00000590619 TMEM99Q8N816 258 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms