RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 FAM71CQ8NEG0 241 aa11.01□□□□□ -0.65
PRKCSH-210ENST00000589990 CKAP2Q8WWK9 683 aa11.01□□□□□ -0.65
PRKCSH-210ENST00000589990 TMEM234Q8WY98 164 aa11.01□□□□□ -0.65
PRKCSH-210ENST00000589990 BCL2L2Q92843 193 aaPredicted RBP11.01□□□□□ -0.65
PRKCSH-210ENST00000589990 ARL8AQ96BM9 186 aa11.01□□□□□ -0.65
PRKCSH-210ENST00000589990 ALKBH3Q96Q83 286 aaPredicted RBP11.01□□□□□ -0.65
PRKCSH-210ENST00000589990 NMUR2Q9GZQ4 415 aa11.01□□□□□ -0.65
PRKCSH-210ENST00000589990 VIPAS39Q9H9C1 493 aa11.01□□□□□ -0.65
PRKCSH-210ENST00000589990 DYNLRB1Q9NP97 96 aa11.01□□□□□ -0.65
PRKCSH-210ENST00000589990 MKS1Q9NXB0 559 aa11.01□□□□□ -0.65
PRKCSH-210ENST00000589990 TMEM181Q9P2C4 612 aa11.01□□□□□ -0.65
PRKCSH-210ENST00000589990 CRNNQ9UBG3 495 aaPredicted RBP11.01□□□□□ -0.65
PRKCSH-210ENST00000589990 MID2Q9UJV3 735 aa11.01□□□□□ -0.65
PRKCSH-210ENST00000589990 FAF1Q9UNN5 650 aaPredicted RBP11.01□□□□□ -0.65
PRKCSH-210ENST00000589990 FIS1Q9Y3D6 152 aa11.01□□□□□ -0.65
PRKCSH-210ENST00000589990 HDGFL3Q9Y3E1 203 aa11.01□□□□□ -0.65
PRKCSH-210ENST00000589990 PCDHB14Q9Y5E9 798 aa11.01□□□□□ -0.65
PRKCSH-210ENST00000589990 WNK2Q9Y3S1 2297 aa11.01□□□□□ -0.65
PRKCSH-210ENST00000589990 TMEM72A0PK05 275 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 AP3D1O14617 1153 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 DNPH1O43598 174 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 TYROBPO43914 113 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 CRCPO75575 148 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 BCKDHAP12694 445 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 KHKP50053 298 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 MAGOHP61326 146 aaKnown RBP11□□□□□ -0.65
PRKCSH-210ENST00000589990 LMO4P61968 165 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 UBA52P62987 128 aaKnown RBP11□□□□□ -0.65
PRKCSH-210ENST00000589990 CFAP157Q5JU67 520 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 AGBL2Q5U5Z8 902 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 SHISA2Q6UWI4 295 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 AAED1Q7RTV5 226 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 C10orf107Q8IVU9 208 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 TMEM99Q8N816 258 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 NUP37Q8NFH4 326 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 ZNF563Q8TA94 476 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 PSMA8Q8TAA3 256 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 YIPF5Q969M3 257 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 MRPL24Q96A35 216 aaKnown RBP11□□□□□ -0.65
PRKCSH-210ENST00000589990 TMEM45BQ96B21 275 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 ZG16BQ96DA0 208 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 BOD1Q96IK1 185 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 ZNF442Q9H7R0 627 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 SSU72Q9NP77 194 aaKnown RBP11□□□□□ -0.65
PRKCSH-210ENST00000589990 G6PC2Q9NQR9 355 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 PARPBPQ9NWS1 579 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 OXSMQ9NWU1 459 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 GRIP1Q9Y3R0 1128 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 PPIAL4AQ9Y536 164 aa11□□□□□ -0.65
PRKCSH-210ENST00000589990 ARHGAP32A7KAX9 2087 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 IGHV2OR16-5A0A0B4J2B6 119 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 WDR91A4D1P6 747 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 OR6C65A6NJZ3 312 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 SCAMP2O15127 329 aaKnown RBP10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 TRIM13O60858 407 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 UPK3AO75631 287 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 AKR7A3O95154 331 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 PNPP00491 289 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 LINC00032P0C843 101 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 SAGP10523 405 aaPredicted RBP10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 ZFP36P26651 326 aaKnown RBP10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 GPR6P46095 362 aaPredicted RBP10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 LIMS1P48059 325 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 SELENOPP49908 381 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 PDCD2Q16342 344 aaPredicted RBP10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 SPDYE7PQ495Y7 208 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 GALNTL6Q49A17 601 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 HIST2H2BDQ6DRA6 164 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 KRT80Q6KB66 452 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 GRINAQ7Z429 371 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 OR4F15Q8NGB8 312 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 OR9K2Q8NGE7 335 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 OR56A1Q8NGH5 318 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 DUX5Q96PT3 197 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 PAIP2Q9BPZ3 127 aaKnown RBP10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 TMPRSS13Q9BYE2 586 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 OBP2BQ9NPH6 170 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 TMEM45AQ9NWC5 275 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 ATP6V1HQ9UI12 483 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 TRAPPC4Q9Y296 219 aa10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 SPIN1Q9Y657 262 aaPredicted RBP10.99□□□□□ -0.65
PRKCSH-210ENST00000589990 TMED7-TICAM2A0A0A6YYA0 188 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 ARPC4-TTLL3A0A0A6YYG9 625 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 SLC28A1O00337 649 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 LSM1O15116 133 aaKnown RBP10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 TM9SF1O15321 606 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 NCR1O76036 304 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 IGKV3-15P01624 115 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 ERCC1P07992 297 aaPredicted RBP10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 HKR1P10072 659 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 UROSP10746 265 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 NEFHP12036 1026 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 ALDH3A1P30838 453 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 IDH2P48735 452 aaKnown RBP10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 SEC24CP53992 1094 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 DNAJB13P59910 316 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 UBE2NP61088 152 aaKnown RBP10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 SLC35A1P78382 337 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 FUT5Q11128 374 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 MPP2Q14168 576 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms