RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 ACTG2P63267 376 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 E2F1Q01094 437 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 FABP5Q01469 135 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 ACY1Q03154 408 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 FHL1Q13642 323 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 IL10RAQ13651 578 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 KCNAB1Q14722 419 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 EBPQ15125 230 aaKnown RBP9.1□□□□□ -0.95
VPS25-202ENST00000589219 ELOA3BQ3SY89 546 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 SLC35F1Q5T1Q4 408 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 HES3Q5TGS1 186 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 HLA-DQA1Q5Y7H0 255 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 SLC29A4Q7RTT9 530 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 KANSL1Q7Z3B3 1105 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 ATG4DQ86TL0 474 aaPredicted RBP9.1□□□□□ -0.95
VPS25-202ENST00000589219 MARCH9Q86YJ5 346 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 KLBQ86Z14 1044 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 TMEM99Q8N816 258 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 POC5Q8NA72 575 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 ZSCAN1Q8NBB4 408 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 C17orf47Q8NEP4 570 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 ELOA3Q8NG57 546 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 OR10H4Q8NGA5 316 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 OR51A7Q8NH64 312 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 ZNF721Q8TF20 911 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 LIPHQ8WWY8 451 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 ASB15Q8WXK1 588 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 TSLPQ969D9 159 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 NACC2Q96BF6 587 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 EFHD2Q96C19 240 aaPredicted RBP9.1□□□□□ -0.95
VPS25-202ENST00000589219 ERMAPQ96PL5 475 aaPredicted RBP9.1□□□□□ -0.95
VPS25-202ENST00000589219 TNFRSF13CQ96RJ3 184 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 CNN2Q99439 309 aaKnown RBP9.1□□□□□ -0.95
VPS25-202ENST00000589219 KATNB1Q9BVA0 655 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 OR8D2Q9GZM6 311 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 NRSN2Q9GZP1 204 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 LAT2Q9GZY6 243 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 NXF5Q9H1B4 397 aaKnown RBP9.1□□□□□ -0.95
VPS25-202ENST00000589219 MED20Q9H944 212 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 ADGRL4Q9HBW9 690 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 WDR70Q9NW82 654 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 BABAM2Q9NXR7 383 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 ADAM30Q9UKF2 790 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 YARS2Q9Y2Z4 477 aaKnown RBP9.1□□□□□ -0.95
VPS25-202ENST00000589219 V9GYH0 126 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 NINQ8N4C6 2090 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 ATRXP46100 2492 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 GTPBP1O00178 669 aaKnown RBP9.09□□□□□ -0.95
VPS25-202ENST00000589219 CTDSP2O14595 271 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 IMPA2O14732 288 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 CASKO14936 926 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 EIF4E2O60573 245 aaKnown RBP9.09□□□□□ -0.95
VPS25-202ENST00000589219 GIMD1P0DJR0 217 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 HOXB1P14653 301 aaPredicted RBP9.09□□□□□ -0.95
VPS25-202ENST00000589219 CELP19835 753 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 ALAS2P22557 587 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 F8A1P23610 371 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 PTBP1P26599 531 aaKnown RBP eCLIP9.09□□□□□ -0.95
VPS25-202ENST00000589219 DAB2P98082 770 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 CFHR1Q03591 330 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 HSF2Q03933 536 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 SQSTM1Q13501 440 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 NR0B2Q15466 257 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.09□□□□□ -0.95
VPS25-202ENST00000589219 NDUFAF6Q330K2 333 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 VASNQ6EMK4 673 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 MZT2AQ6P582 158 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 LRRC69Q6ZNQ3 347 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 SNX29P2Q8IUI4 249 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 LAX1Q8IWV1 398 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 SYS1Q8N2H4 156 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 SLC25A45Q8N413 288 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 ZFP41Q8N8Y5 198 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 FAM98AQ8NCA5 519 aaKnown RBP9.09□□□□□ -0.95
VPS25-202ENST00000589219 PLPP5Q8NEB5 264 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 OR4C3Q8NH37 302 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 PHOSPHO1Q8TCT1 267 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 ACOT12Q8WYK0 555 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 TMEM203Q969S6 136 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 ADIPOR1Q96A54 375 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 CCDC74AQ96AQ1 378 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 ZNF501Q96CX3 271 aaPredicted RBP9.09□□□□□ -0.95
VPS25-202ENST00000589219 TEAD3Q99594 435 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 TM9SF2Q99805 663 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 DPYSL5Q9BPU6 564 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 TMED9Q9BVK6 235 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 HCAR1Q9BXC0 346 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 ENKD1Q9H0I2 346 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 OR51V1Q9H2C8 321 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 DHCR7Q9UBM7 475 aaKnown RBP9.09□□□□□ -0.95
VPS25-202ENST00000589219 PLEKHB1Q9UF11 243 aaPredicted RBP9.09□□□□□ -0.95
VPS25-202ENST00000589219 HIF3AQ9Y2N7 669 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 PCDHGB7Q9Y5F8 929 aa9.09□□□□□ -0.95
VPS25-202ENST00000589219 CELSR3Q9NYQ7 3312 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 IGKV1D-42A0A075B6H8 117 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 MCIDASD6RGH6 385 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 RRP8O43159 456 aaKnown RBP9.08□□□□□ -0.96
VPS25-202ENST00000589219 SIGLEC6O43699 453 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 CDC40O60508 579 aaKnown RBP eCLIP9.08□□□□□ -0.96
VPS25-202ENST00000589219 DLGAP3O95886 979 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms