RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 CA10Q9NS85 328 aa12.2□□□□□ -0.46
VMP1-209ENST00000588915 CRNNQ9UBG3 495 aaPredicted RBP12.2□□□□□ -0.46
VMP1-209ENST00000588915 SLC35F4A4IF30 521 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 LIPT2A6NK58 231 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 VSTM5A8MXK1 200 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 AP3D1O14617 1153 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 TYROBPO43914 113 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 LY6HO94772 140 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 DBIP07108 87 aaKnown RBP12.19□□□□□ -0.46
VMP1-209ENST00000588915 IL7RP16871 459 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 ZNF23P17027 643 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 RPS4Y1P22090 263 aaKnown RBP12.19□□□□□ -0.46
VMP1-209ENST00000588915 CXCR1P25024 350 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 S100A3P33764 101 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 EPS8Q12929 822 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 CEACAM7Q14002 265 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 SYPL1Q16563 259 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 ZSWIM7Q19AV6 140 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 TBRG1Q3YBR2 411 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 TMEM225Q6GV28 225 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 TMEM99Q8N816 258 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 ANKK1Q8NFD2 765 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 OR4F15Q8NGB8 312 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 WDR60Q8WVS4 1066 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 AURKBQ96GD4 344 aaPredicted RBP12.19□□□□□ -0.46
VMP1-209ENST00000588915 FOXN4Q96NZ1 517 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 ZNF385AQ96PM9 386 aaKnown RBP12.19□□□□□ -0.46
VMP1-209ENST00000588915 RAB1BQ9H0U4 201 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 RAP2CQ9Y3L5 183 aa12.19□□□□□ -0.46
VMP1-209ENST00000588915 ARPC4-TTLL3A0A0A6YYG9 625 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 IGHV1-18A0A0C4DH31 117 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 IGHV4-61A0A0C4DH41 118 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 ZC3H12DA2A288 527 aaKnown RBP12.18□□□□□ -0.46
VMP1-209ENST00000588915 ZNF587BE7ETH6 402 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 E9PBE3 544 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 BIRC5O15392 142 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 KRT33AO76009 404 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 SERPINE1P05121 402 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 PGRP06401 933 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 LBPP18428 481 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 PPOXP50336 477 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 RPL14P50914 215 aaKnown RBP12.18□□□□□ -0.46
VMP1-209ENST00000588915 SH3BGRP55822 239 aaPredicted RBP12.18□□□□□ -0.46
VMP1-209ENST00000588915 IFFO1Q0D2I5 559 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 PDCD2Q16342 344 aaPredicted RBP12.18□□□□□ -0.46
VMP1-209ENST00000588915 HIKESHIQ53FT3 197 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 SPANXN4Q5MJ08 99 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 MRPL2Q5T653 305 aaKnown RBP12.18□□□□□ -0.46
VMP1-209ENST00000588915 ANKRD16Q6P6B7 361 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 RNF130Q86XS8 419 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 ZNF781Q8N8C0 355 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 ANKFN1Q8N957 763 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 OR1K1Q8NGR3 316 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 VRK1Q99986 396 aaPredicted RBP12.18□□□□□ -0.46
VMP1-209ENST00000588915 TAPBPLQ9BX59 468 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 LINC00470Q9BZP3 86 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 PLK3Q9H4B4 646 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 CHODLQ9H9P2 273 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 HAO1Q9UJM8 370 aa12.18□□□□□ -0.46
VMP1-209ENST00000588915 A0A096LPI6 279 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 CCDC154A6NI56 674 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 A8MVM7 634 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 KLF11O14901 512 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 ITM2AO43736 263 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 AKR7A3O95154 331 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 TGFAP01135 160 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 IGLV1-44P01699 117 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 CHRM4P08173 479 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 OR4A8P0C604 315 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 NR2F1P10589 423 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 GIFP27352 417 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 IDH3GP51553 393 aaPredicted RBP12.17□□□□□ -0.46
VMP1-209ENST00000588915 UBE2NP61088 152 aaKnown RBP12.17□□□□□ -0.46
VMP1-209ENST00000588915 ABCE1P61221 599 aaKnown RBP12.17□□□□□ -0.46
VMP1-209ENST00000588915 COPZ1P61923 177 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 NAAAQ02083 359 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 OR7A5Q15622 319 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 FAM174BQ3ZCQ3 159 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 IQCCQ4KMZ1 466 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 WBP2NLQ6ICG8 309 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 OGFOD2Q6N063 350 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 UGT2A3Q6UWM9 527 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 CREB3L2Q70SY1 520 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 SLC46A3Q7Z3Q1 461 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 HMGN2P46Q86SG4 172 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 PEX5LQ8IYB4 626 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 RFLNBQ8N5W9 214 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 NUP37Q8NFH4 326 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 NEU4Q8WWR8 484 aaPredicted RBP12.17□□□□□ -0.46
VMP1-209ENST00000588915 BCL2L2Q92843 193 aaPredicted RBP12.17□□□□□ -0.46
VMP1-209ENST00000588915 HPS1Q92902 700 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 PANX1Q96RD7 426 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 ZNF442Q9H7R0 627 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 RASD1Q9Y272 281 aa12.17□□□□□ -0.46
VMP1-209ENST00000588915 CDHR4A6H8M9 788 aa12.16□□□□□ -0.46
VMP1-209ENST00000588915 RPL36A-HNRNPH2H7BZ11 118 aa12.16□□□□□ -0.46
VMP1-209ENST00000588915 HAX1O00165 279 aa12.16□□□□□ -0.46
VMP1-209ENST00000588915 STAMBPO95630 424 aa12.16□□□□□ -0.46
VMP1-209ENST00000588915 KRT75O95678 551 aa12.16□□□□□ -0.46
VMP1-209ENST00000588915 IGKV3-15P01624 115 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms