RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 C3orf36Q3SXR2 165 aa18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 TMEM225Q6GV28 225 aa18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 KRT80Q6KB66 452 aa18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 EMBQ6PCB8 327 aa18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 HMGN2P46Q86SG4 172 aa18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 TMEM99Q8N816 258 aa18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 ZIC4Q8N9L1 334 aa18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 IFT81Q8WYA0 676 aa18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 PRPF18Q99633 342 aaKnown RBP18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 SERHL2Q9H4I8 314 aa18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 REV1Q9UBZ9 1251 aa18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 M0R233 179 aa18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 PIP5K1BO14986 540 aa18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 LSM1O15116 133 aaKnown RBP18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 IGLV1-44P01699 117 aa18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 ANPEPP15144 967 aa18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 COL8A2P25067 703 aa18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 CAPZA2P47755 286 aa18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 POLR2HP52434 150 aaKnown RBP18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 CEACAM7Q14002 265 aa18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 OR7A5Q15622 319 aa18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 ARHGAP11BQ3KRB8 267 aa18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 ATAD3BQ5T9A4 648 aa18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 NIPAL3Q6P499 406 aa18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 PSMA8Q8TAA3 256 aa18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 RDH5Q92781 318 aa18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 BOD1Q96IK1 185 aa18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 SLC35G5Q96KT7 338 aa18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 FMO2Q99518 471 aa18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 SF3B5Q9BWJ5 86 aaKnown RBP18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 CRLF2Q9HC73 371 aa18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 SLC52A3Q9NQ40 469 aa18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 WDR45Q9Y484 360 aa18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 PPIAL4AQ9Y536 164 aa18.78■□□□□ 0.6
CAPNS1-205ENST00000588780 IGHV2OR16-5A0A0B4J2B6 119 aa18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 WNT9BO14905 357 aa18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 ZNF208O43345 1280 aa18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 GPIP06744 558 aa18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 ACHEP22303 614 aa18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 TACR3P29371 465 aa18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 CASQ1P31415 396 aa18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 SELENOPP49908 381 aa18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 MYBPC1Q00872 1141 aa18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 SLC9B1Q4ZJI4 515 aa18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 ELFN2Q5R3F8 820 aa18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 C6orf120Q7Z4R8 191 aa18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 CLEC4FQ8N1N0 589 aa18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 NATD1Q8N6N6 113 aa18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 LRRC17Q8N6Y2 441 aa18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 FAM71CQ8NEG0 241 aa18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 ACMSDQ8TDX5 336 aa18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 ZNF317Q96PQ6 595 aaPredicted RBP18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 ZNF350Q9GZX5 532 aa18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 MS4A5Q9H3V2 200 aa18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 OSGIN1Q9UJX0 560 aa18.77■□□□□ 0.6
CAPNS1-205ENST00000588780 ZC3H12DA2A288 527 aaKnown RBP18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 SYNGR3O43761 229 aa18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 HPXP02790 462 aa18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 IGFBP1P08833 259 aaPredicted RBP18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 CBR1P16152 277 aa18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 ADRA2CP18825 462 aa18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 UBA52P62987 128 aaKnown RBP18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 ATP6AP1LQ52LC2 224 aa18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 REP15Q6BDI9 236 aa18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 RBMS3Q6XE24 437 aaKnown RBP18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 C1orf229Q6ZS94 237 aaPredicted RBP18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 MYPOPQ86VE0 399 aaPredicted RBP18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 GSPT2Q8IYD1 628 aaKnown RBP18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 MAGEE2Q8TD90 523 aaPredicted RBP18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 XAGE5Q8WWM1 108 aa18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 OR51I1Q9H343 314 aa18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 TUBB1Q9H4B7 451 aa18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 ESM1Q9NQ30 184 aa18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 ADPRHL2Q9NX46 363 aa18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 EMCNQ9ULC0 261 aa18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 NOX1Q9Y5S8 564 aa18.76■□□□□ 0.59
CAPNS1-205ENST00000588780 A0A0G2JMP0 313 aa18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 A0A0X1KG70 313 aa18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 AP3D1O14617 1153 aa18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 UPK3AO75631 287 aa18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 AVPP01185 164 aa18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 IGKV3-15P01624 115 aa18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 TMEM33P57088 247 aa18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 DNAJB13P59910 316 aa18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 HBA1P69905 142 aa18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 KCNJ10P78508 379 aa18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 ROR2Q01974 943 aaKnown RBP18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 PTGR1Q14914 329 aa18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 C1QL2Q7Z5L3 287 aa18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 FAM169BQ8N8A8 192 aa18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 ZDHHC22Q8N966 263 aa18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 OR4M2Q8NGB6 313 aa18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 NANPQ8TBE9 248 aa18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 C22orf15Q8WYQ4 148 aa18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 C1orf50Q9BV19 199 aa18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 TAPBPLQ9BX59 468 aa18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 ZNF275Q9NSD4 429 aaPredicted RBP18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 OXSMQ9NWU1 459 aa18.75■□□□□ 0.59
CAPNS1-205ENST00000588780 GIMAP2Q9UG22 337 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms