RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 SH3D21A4FU49 640 aa23.49■■□□□ 1.35
SCAMP4-210ENST00000588555 ENTPD6O75354 484 aa23.49■■□□□ 1.35
SCAMP4-210ENST00000588555 AHSA1O95433 338 aa23.49■■□□□ 1.35
SCAMP4-210ENST00000588555 HK1P19367 917 aa23.49■■□□□ 1.35
SCAMP4-210ENST00000588555 NUDT6P53370 316 aa23.49■■□□□ 1.35
SCAMP4-210ENST00000588555 DEFB109BQ30KR1 87 aa23.49■■□□□ 1.35
SCAMP4-210ENST00000588555 C3orf33Q6P1S2 294 aa23.49■■□□□ 1.35
SCAMP4-210ENST00000588555 BCDIN3DQ7Z5W3 292 aaKnown RBP23.49■■□□□ 1.35
SCAMP4-210ENST00000588555 LRRC75AQ8NAA5 344 aa23.49■■□□□ 1.35
SCAMP4-210ENST00000588555 MOSPD2Q8NHP6 518 aa23.49■■□□□ 1.35
SCAMP4-210ENST00000588555 DDIT4LQ96D03 193 aa23.49■■□□□ 1.35
SCAMP4-210ENST00000588555 CLN6Q9NWW5 311 aa23.49■■□□□ 1.35
SCAMP4-210ENST00000588555 DNAJC27Q9NZQ0 273 aa23.49■■□□□ 1.35
SCAMP4-210ENST00000588555 BAIAP2Q9UQB8 552 aa23.49■■□□□ 1.35
SCAMP4-210ENST00000588555 SSUH2Q9Y2M2 353 aa23.49■■□□□ 1.35
SCAMP4-210ENST00000588555 GPR52Q9Y2T5 361 aa23.49■■□□□ 1.35
SCAMP4-210ENST00000588555 TPRKBQ9Y3C4 175 aa23.49■■□□□ 1.35
SCAMP4-210ENST00000588555 APC2O95996 2303 aa23.49■■□□□ 1.35
SCAMP4-210ENST00000588555 A0A087WXM4 84 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 OR2T1O43869 369 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 FAM20BO75063 409 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 SLC2A10O95528 541 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 PPP1R3DO95685 299 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 CLPTM1O96005 669 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 EEF1B2P24534 225 aaKnown RBP23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 AQP2P41181 271 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 CCL11P51671 97 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 TUBA4AP68366 448 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 FOXK2Q01167 660 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 SYT14P1Q58G82 188 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 FDCSPQ8NFU4 85 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 OR2M7Q8NG81 312 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 FAM173AQ9BQD7 235 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 POTEKPQ9BYX7 375 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 AMBNQ9NP70 447 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 ZFP64Q9NPA5 681 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 SERINC1Q9NRX5 453 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 SCN3BQ9NY72 215 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 DKKL1Q9UK85 242 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 KCNMB2Q9Y691 235 aa23.48■■□□□ 1.35
SCAMP4-210ENST00000588555 PTGES3LE9PB15 166 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 BLOC1S5-TXNDC5H3BN57 136 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 TFAP2AP05549 437 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 RFPL3SP0C7P2 107 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 SRD5A2P31213 254 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 ZNF773Q6PK81 442 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 DPY19L2P2Q6ZN68 376 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 MAMDC2Q7Z304 686 aaPredicted RBP23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 NANOGNBQ7Z5D8 188 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 IGFN1Q86VF2 1251 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 HAS2Q92819 552 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 LRR1Q96L50 414 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 NRIP3Q9NQ35 241 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 CMC2Q9NRP2 79 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 SEC14L4Q9UDX3 406 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 PSORS1C1Q9UIG5 152 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 RPH3AQ9Y2J0 694 aaPredicted RBP23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 NCKAP5O14513 1909 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 H3BML4 177 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 FZD7O75084 574 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 PEPDP12955 493 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 SELENBP1Q13228 472 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 ZNF362Q5T0B9 420 aaPredicted RBP23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 SLC6A19Q695T7 634 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 ATP6V1C2Q8NEY4 427 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 SLC39A7Q92504 469 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 RELTQ969Z4 430 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 SLC25A36Q96CQ1 311 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 Q96MT0 163 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 FKBP14Q9NWM8 211 aa23.47■■□□□ 1.35
SCAMP4-210ENST00000588555 IMPDH2P12268 514 aa23.46■■□□□ 1.35
SCAMP4-210ENST00000588555 ZNF17P17021 662 aa23.46■■□□□ 1.35
SCAMP4-210ENST00000588555 GRPRP30550 384 aa23.46■■□□□ 1.35
SCAMP4-210ENST00000588555 RPL18Q07020 188 aaKnown RBP23.46■■□□□ 1.35
SCAMP4-210ENST00000588555 PIGFQ07326 219 aa23.46■■□□□ 1.35
SCAMP4-210ENST00000588555 SGCBQ16585 318 aa23.46■■□□□ 1.35
SCAMP4-210ENST00000588555 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.46■■□□□ 1.35
SCAMP4-210ENST00000588555 SLC35F1Q5T1Q4 408 aa23.46■■□□□ 1.35
SCAMP4-210ENST00000588555 MEDAGQ5VYS4 303 aa23.46■■□□□ 1.35
SCAMP4-210ENST00000588555 SULF2Q8IWU5 870 aa23.46■■□□□ 1.35
SCAMP4-210ENST00000588555 ZNF540Q8NDQ6 660 aa23.46■■□□□ 1.35
SCAMP4-210ENST00000588555 MFSD8Q8NHS3 518 aa23.46■■□□□ 1.35
SCAMP4-210ENST00000588555 SLC25A43Q8WUT9 341 aaPredicted RBP23.46■■□□□ 1.35
SCAMP4-210ENST00000588555 SIGLEC11Q96RL6 698 aa23.46■■□□□ 1.35
SCAMP4-210ENST00000588555 BOKQ9UMX3 212 aaPredicted RBP23.46■■□□□ 1.35
SCAMP4-210ENST00000588555 ADAM18Q9Y3Q7 739 aa23.46■■□□□ 1.35
SCAMP4-210ENST00000588555 SPIN1Q9Y657 262 aaPredicted RBP23.46■■□□□ 1.35
SCAMP4-210ENST00000588555 DMXL2Q8TDJ6 3036 aa23.45■■□□□ 1.35
SCAMP4-210ENST00000588555 OR2M5A3KFT3 312 aa23.45■■□□□ 1.34
SCAMP4-210ENST00000588555 CLCA1A8K7I4 914 aa23.45■■□□□ 1.34
SCAMP4-210ENST00000588555 NME2P1O60361 137 aa23.45■■□□□ 1.34
SCAMP4-210ENST00000588555 CEACAM4O75871 244 aa23.45■■□□□ 1.34
SCAMP4-210ENST00000588555 HIST1H2ABP04908 130 aa23.45■■□□□ 1.34
SCAMP4-210ENST00000588555 SP1P08047 785 aa23.45■■□□□ 1.34
SCAMP4-210ENST00000588555 NME2P22392 152 aa23.45■■□□□ 1.34
SCAMP4-210ENST00000588555 GLYR1Q49A26 553 aaPredicted RBP23.45■■□□□ 1.34
SCAMP4-210ENST00000588555 IGFL2Q6UWQ7 119 aa23.45■■□□□ 1.34
SCAMP4-210ENST00000588555 HIST3H2AQ7L7L0 130 aa23.45■■□□□ 1.34
SCAMP4-210ENST00000588555 OR5J2Q8NH18 312 aa23.45■■□□□ 1.34
SCAMP4-210ENST00000588555 GGHQ92820 318 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms