RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 CHST2Q9Y4C5 530 aa19.22■□□□□ 0.67
CIRBP-219ENST00000588411 PRORSD1PA6NEY8 169 aa19.21■□□□□ 0.67
CIRBP-219ENST00000588411 DPRXA6NFQ7 191 aa19.21■□□□□ 0.67
CIRBP-219ENST00000588411 ELOA3DA6NLF2 546 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-219ENST00000588411 FRS3O43559 492 aa19.21■□□□□ 0.67
CIRBP-219ENST00000588411 H2AFXP16104 143 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-219ENST00000588411 SLC6A2P23975 617 aa19.21■□□□□ 0.67
CIRBP-219ENST00000588411 GTF2E2P29084 291 aaKnown RBP19.21■□□□□ 0.67
CIRBP-219ENST00000588411 ATP5J2P56134 94 aa19.21■□□□□ 0.67
CIRBP-219ENST00000588411 ELOA3BQ3SY89 546 aa19.21■□□□□ 0.67
CIRBP-219ENST00000588411 PRR14LQ5THK1 2151 aa19.21■□□□□ 0.67
CIRBP-219ENST00000588411 AAED1Q7RTV5 226 aa19.21■□□□□ 0.67
CIRBP-219ENST00000588411 ABHD12BQ7Z5M8 362 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-219ENST00000588411 ATG4DQ86TL0 474 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-219ENST00000588411 TMEM99Q8N816 258 aa19.21■□□□□ 0.67
CIRBP-219ENST00000588411 C1orf162Q8NEQ5 155 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-219ENST00000588411 BHLHE22Q8NFJ8 381 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-219ENST00000588411 KBTBD8Q8NFY9 601 aa19.21■□□□□ 0.67
CIRBP-219ENST00000588411 ELOA3Q8NG57 546 aa19.21■□□□□ 0.67
CIRBP-219ENST00000588411 OR52N5Q8NH56 324 aa19.21■□□□□ 0.67
CIRBP-219ENST00000588411 SMAP2Q8WU79 429 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-219ENST00000588411 GTPBP3Q969Y2 492 aaKnown RBP19.21■□□□□ 0.67
CIRBP-219ENST00000588411 ZNF607Q96SK3 696 aa19.21■□□□□ 0.67
CIRBP-219ENST00000588411 TMEM38AQ9H6F2 299 aa19.21■□□□□ 0.67
CIRBP-219ENST00000588411 SLC52A3Q9NQ40 469 aa19.21■□□□□ 0.67
CIRBP-219ENST00000588411 LEF1Q9UJU2 399 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-219ENST00000588411 MGAT4BQ9UQ53 548 aa19.21■□□□□ 0.67
CIRBP-219ENST00000588411 ZFHX3Q15911 3703 aa19.21■□□□□ 0.67
CIRBP-219ENST00000588411 TMEM229AB2RXF0 380 aa19.2■□□□□ 0.66
CIRBP-219ENST00000588411 SERPINB7O75635 380 aa19.2■□□□□ 0.66
CIRBP-219ENST00000588411 NTF4P34130 210 aa19.2■□□□□ 0.66
CIRBP-219ENST00000588411 NCALDP61601 193 aa19.2■□□□□ 0.66
CIRBP-219ENST00000588411 SCARB2Q14108 478 aa19.2■□□□□ 0.66
CIRBP-219ENST00000588411 C1QTNF12Q5T7M4 302 aa19.2■□□□□ 0.66
CIRBP-219ENST00000588411 DHRS4L2Q6PKH6 230 aa19.2■□□□□ 0.66
CIRBP-219ENST00000588411 C17orf78Q8N4C9 275 aa19.2■□□□□ 0.66
CIRBP-219ENST00000588411 POMGNT2Q8NAT1 580 aa19.2■□□□□ 0.66
CIRBP-219ENST00000588411 OR52E4Q8NGH9 312 aa19.2■□□□□ 0.66
CIRBP-219ENST00000588411 LILRB1Q8NHL6 650 aaPredicted RBP19.2■□□□□ 0.66
CIRBP-219ENST00000588411 TRMT61AQ96FX7 289 aaKnown RBP19.2■□□□□ 0.66
CIRBP-219ENST00000588411 MUS81Q96NY9 551 aa19.2■□□□□ 0.66
CIRBP-219ENST00000588411 TRIM2Q9C040 744 aa19.2■□□□□ 0.66
CIRBP-219ENST00000588411 ALG2Q9H553 416 aa19.2■□□□□ 0.66
CIRBP-219ENST00000588411 C12orf10Q9HB07 376 aa19.2■□□□□ 0.66
CIRBP-219ENST00000588411 RASD1Q9Y272 281 aa19.2■□□□□ 0.66
CIRBP-219ENST00000588411 TRBV5-3A0A0A0MS03 114 aa19.19■□□□□ 0.66
CIRBP-219ENST00000588411 H7C1Q1 480 aa19.19■□□□□ 0.66
CIRBP-219ENST00000588411 ABCD4O14678 606 aa19.19■□□□□ 0.66
CIRBP-219ENST00000588411 ANGPT2O15123 496 aa19.19■□□□□ 0.66
CIRBP-219ENST00000588411 KRT33AO76009 404 aa19.19■□□□□ 0.66
CIRBP-219ENST00000588411 ITGA5P08648 1049 aa19.19■□□□□ 0.66
CIRBP-219ENST00000588411 GPX2P18283 190 aa19.19■□□□□ 0.66
CIRBP-219ENST00000588411 PTAFRP25105 342 aa19.19■□□□□ 0.66
CIRBP-219ENST00000588411 CDH11P55287 796 aa19.19■□□□□ 0.66
CIRBP-219ENST00000588411 C5orf46Q6UWT4 87 aa19.19■□□□□ 0.66
CIRBP-219ENST00000588411 CLEC9AQ6UXN8 241 aa19.19■□□□□ 0.66
CIRBP-219ENST00000588411 DEPDC4Q8N2C3 294 aa19.19■□□□□ 0.66
CIRBP-219ENST00000588411 MFSD8Q8NHS3 518 aa19.19■□□□□ 0.66
CIRBP-219ENST00000588411 DNAJA4Q8WW22 397 aaPredicted RBP19.19■□□□□ 0.66
CIRBP-219ENST00000588411 COX4I2Q96KJ9 171 aa19.19■□□□□ 0.66
CIRBP-219ENST00000588411 SLCO5A1Q9H2Y9 848 aa19.19■□□□□ 0.66
CIRBP-219ENST00000588411 SLC7A10Q9NS82 523 aa19.19■□□□□ 0.66
CIRBP-219ENST00000588411 SELENONQ9NZV5 590 aa19.19■□□□□ 0.66
CIRBP-219ENST00000588411 ANGPT4Q9Y264 503 aa19.19■□□□□ 0.66
CIRBP-219ENST00000588411 NDUFAF1Q9Y375 327 aa19.19■□□□□ 0.66
CIRBP-219ENST00000588411 MAGED1Q9Y5V3 778 aaPredicted RBP19.19■□□□□ 0.66
CIRBP-219ENST00000588411 SLC25A15Q9Y619 301 aa19.19■□□□□ 0.66
CIRBP-219ENST00000588411 OR6C65A6NJZ3 312 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 PDLIM1O00151 329 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 NPIPB7O75200 414 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 PNMTP11086 282 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 MPGP29372 298 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 HOXC5Q00444 222 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 ETFDHQ16134 617 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 GABRA6Q16445 453 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 TSPO2Q5TGU0 170 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 KLHL24Q6TFL4 600 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 C6orf89Q6UWU4 347 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 LSMEM1Q8N8F7 131 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 HIPK4Q8NE63 616 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 NEUROG1Q92886 237 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 THOC1Q96FV9 657 aaKnown RBP19.18■□□□□ 0.66
CIRBP-219ENST00000588411 AMBRA1Q9C0C7 1298 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 EVA1AQ9H8M9 152 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 NPHS2Q9NP85 383 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 CISD1Q9NZ45 108 aaKnown RBP19.18■□□□□ 0.66
CIRBP-219ENST00000588411 NPAP1Q9NZP6 1156 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 POU2F3Q9UKI9 436 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 AMDHD2Q9Y303 409 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 VPS13CQ709C8 3753 aa19.18■□□□□ 0.66
CIRBP-219ENST00000588411 OR2T1O43869 369 aa19.17■□□□□ 0.66
CIRBP-219ENST00000588411 EDF1O60869 148 aaKnown RBP19.17■□□□□ 0.66
CIRBP-219ENST00000588411 DANCRP0C864 163 aa19.17■□□□□ 0.66
CIRBP-219ENST00000588411 ZNF83P51522 516 aa19.17■□□□□ 0.66
CIRBP-219ENST00000588411 C9orf135Q5VTT2 229 aa19.17■□□□□ 0.66
CIRBP-219ENST00000588411 DHDDSQ86SQ9 333 aa19.17■□□□□ 0.66
CIRBP-219ENST00000588411 PIAS4Q8N2W9 510 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-219ENST00000588411 ZIC4Q8N9L1 334 aa19.17■□□□□ 0.66
CIRBP-219ENST00000588411 TSPEARQ8WU66 669 aa19.17■□□□□ 0.66
CIRBP-219ENST00000588411 SLC25A36Q96CQ1 311 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms