RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 TSC22D1Q15714 1073 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 DUSP7Q16829 419 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 FAM91A1Q658Y4 838 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 ALKBH2Q6NS38 261 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 C5orf46Q6UWT4 87 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 CALHM3Q86XJ0 350 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 WFDC8Q8IUA0 241 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 TMEM99Q8N816 258 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 OR2T12Q8NG77 320 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 GPR32P1Q8NGA4 272 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 SLC38A4Q969I6 547 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 S100PBPQ96BU1 408 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 SLC25A36Q96CQ1 311 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 SLC47A1Q96FL8 570 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 OR10A4Q9H209 315 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 EDARQ9UNE0 448 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 USP22Q9UPT9 525 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 HRNRQ86YZ3 2850 aaPredicted RBP13.12□□□□□ -0.31
ATG4D-207ENST00000587256 A0A0B4J2E0 115 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 A0A1B0GX12 115 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 GMNCA6NCL1 334 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 CCT8L1PA6NM43 557 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 DEFB108AA8MXU0 73 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 SNX3O60493 162 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 FMO6PO60774 539 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 LYZL6O75951 148 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 LGI1O95970 557 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 CD247P20963 164 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 PTNP21246 168 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 DNAJA1P31689 397 aaKnown RBP13.12□□□□□ -0.31
ATG4D-207ENST00000587256 NUDT2P50583 147 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 ITGADQ13349 1161 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 NRF1Q16656 503 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 LRRC23Q53EV4 343 aaPredicted RBP13.12□□□□□ -0.31
ATG4D-207ENST00000587256 SFRP5Q5T4F7 317 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 SWT1Q5T5J6 900 aaKnown RBP13.12□□□□□ -0.31
ATG4D-207ENST00000587256 BHLHA15Q7RTS1 189 aaPredicted RBP13.12□□□□□ -0.31
ATG4D-207ENST00000587256 TREML1Q86YW5 311 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 OR9K2Q8NGE7 335 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 MFSD8Q8NHS3 518 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 PROX1Q92786 737 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 KTI12Q96EK9 354 aaPredicted RBP13.12□□□□□ -0.31
ATG4D-207ENST00000587256 MCHR1Q99705 422 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 WFDC6Q9BQY6 131 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 PTDSS2Q9BVG9 487 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 SF3B5Q9BWJ5 86 aaKnown RBP13.12□□□□□ -0.31
ATG4D-207ENST00000587256 HDHD5Q9BXW7 423 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 FLVCR1Q9Y5Y0 555 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 AKAP6Q13023 2319 aa13.12□□□□□ -0.31
ATG4D-207ENST00000587256 ABCA4P78363 2273 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 TRAV36DV7A0A075B6V5 113 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 CPSF4LA6NMK7 179 aaKnown RBP13.11□□□□□ -0.31
ATG4D-207ENST00000587256 SIAH2O43255 324 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 OR2T1O43869 369 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 CNOT4O95628 575 aaKnown RBP13.11□□□□□ -0.31
ATG4D-207ENST00000587256 IFNA14P01570 189 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 THBDP07204 575 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 EGR4Q05215 589 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 VEZF1Q14119 521 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 SLC17A1Q14916 467 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 STK11Q15831 433 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 BEX5Q5H9J7 111 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 FAM69AQ5T7M9 428 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 FBXW9Q5XUX1 488 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 TMEM225Q6GV28 225 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 PAMR1Q6UXH9 720 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 C22orf34Q6ZV56 151 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 CCDC80Q76M96 950 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 P3H2Q8IVL5 708 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 OR6T1Q8NGN1 323 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 ZNF583Q96ND8 569 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 EPYCQ99645 322 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 LIME1Q9H400 295 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 EFCAB1Q9HAE3 211 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 PARPBPQ9NWS1 579 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 ST6GALNAC2Q9UJ37 374 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 BAG5Q9UL15 447 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 PLEKHA6Q9Y2H5 1048 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 AP3M1Q9Y2T2 418 aa13.11□□□□□ -0.31
ATG4D-207ENST00000587256 OTOGQ6ZRI0 2925 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 IGKV1D-42A0A075B6H8 117 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 A0A087WUJ7 227 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.1□□□□□ -0.31
ATG4D-207ENST00000587256 ELOVL7A1L3X0 281 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 FTCDNL1E5RQL4 147 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 TPST2O60704 377 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 VAMP5O95183 116 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 COX5AP20674 150 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 IGHV1-2P23083 117 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 DNASE1P24855 282 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 SLC7A2P52569 658 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 CRYBA2P53672 197 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 CDH12P55289 794 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 IL1RL1Q01638 556 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 NPTX1Q15818 432 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 ENTPD8Q5MY95 495 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 ZNF613Q6PF04 617 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 AAED1Q7RTV5 226 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 RBM45Q8IUH3 476 aaKnown RBP13.1□□□□□ -0.31
ATG4D-207ENST00000587256 MICU2Q8IYU8 434 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms