RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 IPCEF1Q8WWN9 437 aaPredicted RBP11.43□□□□□ -0.58
VMP1-202ENST00000585847 SGTBQ96EQ0 304 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 FAM173AQ9BQD7 235 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 POLDIP3Q9BY77 421 aaKnown RBP11.43□□□□□ -0.58
VMP1-202ENST00000585847 FKRPQ9H9S5 495 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 CTPS2Q9NRF8 586 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 SCN3BQ9NY72 215 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 B4GALT7Q9UBV7 327 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 ZNF229Q9UJW7 825 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 SLC6A5Q9Y345 797 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 TPRKBQ9Y3C4 175 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 MRPS18CQ9Y3D5 142 aaKnown RBP11.43□□□□□ -0.58
VMP1-202ENST00000585847 ZNF337Q9Y3M9 751 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 CORINQ9Y5Q5 1042 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 LRRK2Q5S007 2527 aa11.43□□□□□ -0.58
VMP1-202ENST00000585847 TRAV36DV7A0A075B6V5 113 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 A0A087WXM4 84 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 GNB5O14775 395 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 IDH3BO43837 385 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 FZD7O75084 574 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 CBR3O75828 277 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 SAGP10523 405 aaPredicted RBP11.42□□□□□ -0.58
VMP1-202ENST00000585847 MST1P26927 711 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 TACR3P29371 465 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 SLC6A6P31641 620 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 GIPRP48546 466 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 IL5RAQ01344 420 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 MAD2L1BPQ15013 274 aaPredicted RBP11.42□□□□□ -0.58
VMP1-202ENST00000585847 IGFBP7Q16270 282 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 NDUFAF6Q330K2 333 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 C12orf73Q69YU5 71 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 TIGD3Q6B0B8 471 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 OR5M10Q6IEU7 315 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 ARHGAP11AQ6P4F7 1023 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 SIAH3Q8IW03 269 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 PIP4P2Q8N4L2 257 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 CISD2Q8N5K1 135 aaKnown RBP11.42□□□□□ -0.58
VMP1-202ENST00000585847 RNF217Q8TC41 542 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 FANK1Q8TC84 345 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 DUSP19Q8WTR2 217 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 DDIT4LQ96D03 193 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 SNRNP40Q96DI7 357 aaKnown RBP11.42□□□□□ -0.58
VMP1-202ENST00000585847 FAM46AQ96IP4 442 aaKnown RBP11.42□□□□□ -0.58
VMP1-202ENST00000585847 GPX7Q96SL4 187 aaPredicted RBP11.42□□□□□ -0.58
VMP1-202ENST00000585847 MRPS26Q9BYN8 205 aaKnown RBP11.42□□□□□ -0.58
VMP1-202ENST00000585847 TTTY12Q9BZ98 90 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 UBQLN3Q9H347 655 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 FN3KQ9H479 309 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 PLCXD1Q9NUJ7 323 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 TBC1D23Q9NUY8 699 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 FBXL2Q9UKC9 423 aa11.42□□□□□ -0.58
VMP1-202ENST00000585847 BOKQ9UMX3 212 aaPredicted RBP11.42□□□□□ -0.58
VMP1-202ENST00000585847 ZNF407Q9C0G0 2248 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 MED12Q93074 2177 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 NPIPB13A6NJU9 1138 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 GJE1A6NN92 205 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 ENO4A6NNW6 628 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 NPIPB4C9JG80 1138 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 KLRC4-KLRK1H3BQV0 150 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 MITFO75030 526 aaPredicted RBP11.41□□□□□ -0.58
VMP1-202ENST00000585847 ADAM11O75078 769 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 NDUFB2O95178 105 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 AHSA1O95433 338 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 NTN1O95631 604 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 GNAO1P09471 354 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 PRKCAP17252 672 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 GRK5P34947 590 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 PCYT1AP49585 367 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 DSCR4P56555 118 aaPredicted RBP11.41□□□□□ -0.58
VMP1-202ENST00000585847 RPS4XP62701 263 aaKnown RBP11.41□□□□□ -0.58
VMP1-202ENST00000585847 FOXK1P85037 733 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 CDK5Q00535 292 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 CRYZQ08257 329 aaKnown RBP11.41□□□□□ -0.58
VMP1-202ENST00000585847 SELENBP1Q13228 472 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 TMED1Q13445 227 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 INAQ16352 499 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 ZBED5Q49AG3 693 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 TMEM201Q5SNT2 666 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 C6orf141Q5SZD1 244 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 ARMC4Q5T2S8 1044 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 FAM69AQ5T7M9 428 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 C3orf33Q6P1S2 294 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 SMARCD3Q6STE5 483 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 OAFQ86UD1 273 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 LSRQ86X29 649 aaPredicted RBP11.41□□□□□ -0.58
VMP1-202ENST00000585847 ZNF786Q8N393 782 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 GTPBP8Q8N3Z3 284 aaPredicted RBP11.41□□□□□ -0.58
VMP1-202ENST00000585847 TMEM251Q8N6I4 163 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 SCAIQ8N9R8 606 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 OR2M3Q8NG83 312 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 RHOXF1Q8NHV9 184 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 FAM81AQ8TBF8 368 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 RFKQ969G6 155 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 C1GALT1C1Q96EU7 318 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 SH3YL1Q96HL8 342 aaPredicted RBP11.41□□□□□ -0.58
VMP1-202ENST00000585847 GNRHR2Q96P88 292 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 NPAS1Q99742 590 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 POTEKPQ9BYX7 375 aa11.41□□□□□ -0.58
VMP1-202ENST00000585847 ZNF703Q9H7S9 590 aaPredicted RBP11.41□□□□□ -0.58
VMP1-202ENST00000585847 ZFP64Q9NPA5 681 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms