RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 TACR3P29371 465 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 C21orf33P30042 268 aaPredicted RBP9.45□□□□□ -0.9
LIG3-203ENST00000585370 HTR1FP30939 366 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 MAP2K4P45985 399 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 MTNR1AP48039 350 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 MASP1P48740 699 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 NUDT6P53370 316 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 GP2P55259 537 aaKnown RBP9.45□□□□□ -0.9
LIG3-203ENST00000585370 ZNF91Q05481 1191 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 NTRK2Q16620 822 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 CLEC12AQ5QGZ9 265 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 AADACL4Q5VUY2 407 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 ARHGAP11AQ6P4F7 1023 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 CBLN3Q6UW01 205 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 LYPD8Q6UX82 237 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 HIST3H2AQ7L7L0 130 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 GRINAQ7Z429 371 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 MEX3DQ86XN8 651 aaKnown RBP9.45□□□□□ -0.9
LIG3-203ENST00000585370 ARMC10Q8N2F6 343 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 PROKR2Q8NFJ6 384 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 OR13C2Q8NGS9 318 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 OR51A7Q8NH64 312 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 STK35Q8TDR2 534 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 DUSP19Q8WTR2 217 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 HIST1H2ACQ93077 130 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 C12orf43Q96C57 262 aaKnown RBP9.45□□□□□ -0.9
LIG3-203ENST00000585370 COG8Q96MW5 612 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 TNFRSF13CQ96RJ3 184 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 GPX7Q96SL4 187 aaPredicted RBP9.45□□□□□ -0.9
LIG3-203ENST00000585370 MND1Q9BWT6 205 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 TAS2R10Q9NYW0 307 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 IL17BQ9UHF5 180 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 TCFL5Q9UL49 500 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 EXOSC1Q9Y3B2 195 aaKnown RBP9.45□□□□□ -0.9
LIG3-203ENST00000585370 TRAV36DV7A0A075B6V5 113 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 A8MVM7 634 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 PRR23D1E9PI22 279 aaPredicted RBP9.44□□□□□ -0.9
LIG3-203ENST00000585370 M0R129 80 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 SOCS6O14544 535 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 SCO2O43819 266 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 OR2T1O43869 369 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 SLC25A12O75746 678 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 OR2J2O76002 312 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 CH25HO95992 272 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 HPP00738 406 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 PRR23D2P0DMB1 279 aaPredicted RBP9.44□□□□□ -0.9
LIG3-203ENST00000585370 SFTPCP11686 197 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 LIFP15018 202 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 ZNF3P17036 446 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 MYL12AP19105 171 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 CCNA2P20248 432 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 FKBP2P26885 142 aaKnown RBP9.44□□□□□ -0.9
LIG3-203ENST00000585370 APOBEC1P41238 236 aaKnown RBP9.44□□□□□ -0.9
LIG3-203ENST00000585370 GAS1P54826 345 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 CDH11P55287 796 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 FBXW4P57775 412 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 FOXL2P58012 376 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 FXYD6P3P58550 94 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 C1DQ13901 141 aaKnown RBP9.44□□□□□ -0.9
LIG3-203ENST00000585370 MFSD13AQ14CX5 517 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 QPRTQ15274 297 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 ZNF791Q3KP31 576 aaPredicted RBP9.44□□□□□ -0.9
LIG3-203ENST00000585370 FAM69BQ5VUD6 431 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 CXXC5Q7LFL8 322 aaKnown RBP9.44□□□□□ -0.9
LIG3-203ENST00000585370 OR11G2Q8NGC1 345 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 THAP3Q8WTV1 239 aaPredicted RBP9.44□□□□□ -0.9
LIG3-203ENST00000585370 CT55Q8WUE5 264 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 SPACA9Q96E40 222 aaPredicted RBP9.44□□□□□ -0.9
LIG3-203ENST00000585370 YIPF6Q96EC8 236 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 RNF31Q96EP0 1072 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 SH3YL1Q96HL8 342 aaPredicted RBP9.44□□□□□ -0.9
LIG3-203ENST00000585370 IP6K3Q96PC2 410 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 RASL10BQ96S79 203 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 FUNDC2Q9BWH2 189 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 JAM3Q9BX67 310 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 FKRPQ9H9S5 495 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 LIN28AQ9H9Z2 209 aaKnown RBP9.44□□□□□ -0.9
LIG3-203ENST00000585370 MCCC2Q9HCC0 563 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 ISYNA1Q9NPH2 558 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 NANSQ9NR45 359 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 ENPP5Q9UJA9 477 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 ZNF229Q9UJW7 825 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 OSGIN1Q9UJX0 560 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 EXOGQ9Y2C4 368 aaKnown RBP9.44□□□□□ -0.9
LIG3-203ENST00000585370 LRRK2Q5S007 2527 aa9.44□□□□□ -0.9
LIG3-203ENST00000585370 NBPF19A0A087WUL8 3843 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 IGKV1D-42A0A075B6H8 117 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 TMED7-TICAM2A0A0A6YYA0 188 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 SLC22A31A6NKX4 558 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 FAM47E-STBD1D6RA91 191 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 ETV2O00321 342 aaPredicted RBP9.43□□□□□ -0.9
LIG3-203ENST00000585370 CDK2AP1O14519 115 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 SLC22A1O15245 554 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 ADORA3P0DMS8 318 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 NOS3P29474 1203 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 CAPZA2P47755 286 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 RPS4XP62701 263 aaKnown RBP9.43□□□□□ -0.9
LIG3-203ENST00000585370 LGALS3BPQ08380 585 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 POU4F2Q12837 409 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms