RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 PMS2P2O95744 297 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 ACTL6AO96019 429 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 TFPIP10646 304 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 ZNF708P17019 499 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 UQCRC1P31930 480 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 LHX2P50458 406 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 CRISP1P54107 249 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 ADARB1P78563 741 aaKnown RBP14.51□□□□□ -0.09
SS18-226ENST00000585241 TMEM176BQ3YBM2 270 aaPredicted RBP14.51□□□□□ -0.09
SS18-226ENST00000585241 SLC36A3Q495N2 470 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 NADK2Q4G0N4 442 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 TMPPEQ6ZT21 453 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 ESPNLQ6ZVH7 1005 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 MAMDC2Q7Z304 686 aaPredicted RBP14.51□□□□□ -0.09
SS18-226ENST00000585241 OAFQ86UD1 273 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 DHRSXQ8N5I4 330 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 LRRC17Q8N6Y2 441 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 EXD3Q8N9H8 876 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 SCAIQ8N9R8 606 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 ADPRHL1Q8NDY3 354 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 TFAP2CQ92754 450 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 MCCC2Q9HCC0 563 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 ZNF71Q9NQZ8 489 aaPredicted RBP14.51□□□□□ -0.09
SS18-226ENST00000585241 FAM118AQ9NWS6 357 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 ALKBH4Q9NXW9 302 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 MRPL39Q9NYK5 338 aaKnown RBP14.51□□□□□ -0.09
SS18-226ENST00000585241 RAB26Q9ULW5 256 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 SLC6A5Q9Y345 797 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 LRRC42Q9Y546 428 aa14.51□□□□□ -0.09
SS18-226ENST00000585241 MAP1BP46821 2468 aaKnown RBP14.5□□□□□ -0.09
SS18-226ENST00000585241 TRGV5A0A0B4J1U4 118 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 A0A0J9YW62 118 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 ZAR1LA6NP61 321 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 RCBTB2O95199 551 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 SOX14O95416 240 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 CRYABP02511 175 aaKnown RBP14.5□□□□□ -0.09
SS18-226ENST00000585241 SFTPCP11686 197 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 BMP7P18075 431 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 POU3F2P20265 443 aaPredicted RBP14.5□□□□□ -0.09
SS18-226ENST00000585241 EPHA2P29317 976 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 SFTPDP35247 375 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 POLR2IP36954 125 aaKnown RBP14.5□□□□□ -0.09
SS18-226ENST00000585241 CLDN18P56856 261 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 IL1RL1Q01638 556 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 C19orf57Q0VDD7 668 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 SGCBQ16585 318 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 ZIK1Q3SY52 487 aaPredicted RBP14.5□□□□□ -0.09
SS18-226ENST00000585241 ZBED5Q49AG3 693 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 VASNQ6EMK4 673 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 SMARCD3Q6STE5 483 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 ATP6V1C2Q8NEY4 427 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 OR8D4Q8NGM9 314 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 OR5J2Q8NH18 312 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 FANK1Q8TC84 345 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 HRASLS5Q96KN8 279 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 OR5B2Q96R09 309 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 GPX7Q96SL4 187 aaPredicted RBP14.5□□□□□ -0.09
SS18-226ENST00000585241 TAPBPLQ9BX59 468 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 PLA2G12AQ9BZM1 189 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 DEFB127Q9H1M4 99 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 OR52D1Q9H346 318 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 RIBC2Q9H4K1 309 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 SLC25A19Q9HC21 320 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 FANCFQ9NPI8 374 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 NDRG4Q9ULP0 352 aaKnown RBP14.5□□□□□ -0.09
SS18-226ENST00000585241 ZNF407Q9C0G0 2248 aa14.5□□□□□ -0.09
SS18-226ENST00000585241 TLN1Q9Y490 2541 aaKnown RBP14.49□□□□□ -0.09
SS18-226ENST00000585241 DNAJC13O75165 2243 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 TRAV27A0A087WT01 109 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 A0A1W2PNR3 127 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 IGFBP1P08833 259 aaPredicted RBP14.49□□□□□ -0.09
SS18-226ENST00000585241 GRPRP30550 384 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 CAPGP40121 348 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 DIO1P49895 249 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 CLDN15P56746 228 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 CLDN20P56880 219 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 NUP107P57740 925 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 PRPS1P60891 318 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 KEAP1Q14145 624 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 OR7A5Q15622 319 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 WLSQ5T9L3 541 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 TTC23Q5W5X9 447 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 ZNF324BQ6AW86 544 aaPredicted RBP14.49□□□□□ -0.09
SS18-226ENST00000585241 USP51Q70EK9 711 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 C10orf53Q8N6V4 93 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 LRRC75AQ8NAA5 344 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 OSTF1Q92882 214 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 ABTB1Q969K4 478 aaPredicted RBP14.49□□□□□ -0.09
SS18-226ENST00000585241 TNFRSF13CQ96RJ3 184 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 SLC25A18Q9H1K4 315 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 EGLN3Q9H6Z9 239 aa14.49□□□□□ -0.09
SS18-226ENST00000585241 LOC100130705A0A1B0GUX0 176 aa14.48□□□□□ -0.09
SS18-226ENST00000585241 M0R082 166 aa14.48□□□□□ -0.09
SS18-226ENST00000585241 ERVH48-1M5A8F1 160 aa14.48□□□□□ -0.09
SS18-226ENST00000585241 AQP7O14520 342 aa14.48□□□□□ -0.09
SS18-226ENST00000585241 NDUFB2O95178 105 aa14.48□□□□□ -0.09
SS18-226ENST00000585241 CPN1P15169 458 aa14.48□□□□□ -0.09
SS18-226ENST00000585241 STARP49675 285 aa14.48□□□□□ -0.09
SS18-226ENST00000585241 P2RY4P51582 365 aa14.48□□□□□ -0.09
SS18-226ENST00000585241 RPS6KA3P51812 740 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms