RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 TAS2R16Q9NYV7 291 aa10.94□□□□□ -0.66
SS18-225ENST00000585121 ANGPT4Q9Y264 503 aa10.94□□□□□ -0.66
SS18-225ENST00000585121 FLVCR1Q9Y5Y0 555 aa10.94□□□□□ -0.66
SS18-225ENST00000585121 TRBV5-3A0A0A0MS03 114 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 OR5H1A6NKK0 313 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 AQP7P3A6NL99 342 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 FRS3O43559 492 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 RAMP1O60894 148 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 PLAUP00749 431 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 GPX2P18283 190 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 EDNRAP25101 427 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 ADSLP30566 484 aaPredicted RBP10.93□□□□□ -0.66
SS18-225ENST00000585121 HOXC5Q00444 222 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 TGFBR3Q03167 851 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 FAPQ12884 760 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 NFYCQ13952 458 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 CYP51A1Q16850 503 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 RUNDC3AQ59EK9 446 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 KLHL17Q6TDP4 642 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 C5orf46Q6UWT4 87 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 DLEU7Q6UYE1 221 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 ABHD12BQ7Z5M8 362 aaPredicted RBP10.93□□□□□ -0.66
SS18-225ENST00000585121 ATG4DQ86TL0 474 aaPredicted RBP10.93□□□□□ -0.66
SS18-225ENST00000585121 DPP10Q8N608 796 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 TMEM99Q8N816 258 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 C11orf65Q8NCR3 313 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 WFDC11Q8NEX6 87 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 OR9K2Q8NGE7 335 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 PERPQ96FX8 193 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 EVA1AQ9H8M9 152 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 C12orf10Q9HB07 376 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 MALT1Q9UDY8 824 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 RASD1Q9Y272 281 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 CHST2Q9Y4C5 530 aa10.93□□□□□ -0.66
SS18-225ENST00000585121 SETD2Q9BYW2 2564 aaPredicted RBP10.92□□□□□ -0.66
SS18-225ENST00000585121 C2CD3Q4AC94 2353 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 ZFHX3Q15911 3703 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 FREM1Q5H8C1 2179 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 RAD51DO75771 328 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 KRT33AO76009 404 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 FAM107AO95990 144 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 PNMTP11086 282 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 SEC24CP53992 1094 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 BSPH1Q075Z2 132 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 RBBP4Q09028 425 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 Q5PR19 223 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 ADAM5Q6NVV9 412 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 PRSS57Q6UWY2 283 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 AAED1Q7RTV5 226 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 ARMC8Q8IUR7 673 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 OR52E4Q8NGH9 312 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 MFSD8Q8NHS3 518 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 RNF217Q8TC41 542 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 BCAS4Q8TDM0 211 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 DNAJA4Q8WW22 397 aaPredicted RBP10.92□□□□□ -0.66
SS18-225ENST00000585121 FBXW5Q969U6 566 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 TMEM45BQ96B21 275 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 SLC25A36Q96CQ1 311 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 CCT8L2Q96SF2 557 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 CGREF1Q99674 301 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 CPPED1Q9BRF8 314 aaPredicted RBP10.92□□□□□ -0.66
SS18-225ENST00000585121 TMEM27Q9HBJ8 222 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 ARID1AO14497 2285 aa10.92□□□□□ -0.66
SS18-225ENST00000585121 ACANP16112 2415 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 ZNF469Q96JG9 3925 aaPredicted RBP10.91□□□□□ -0.66
SS18-225ENST00000585121 OR6C65A6NJZ3 312 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 TMEM229AB2RXF0 380 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 OR2T1O43869 369 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 VIMP08670 466 aaKnown RBP10.91□□□□□ -0.66
SS18-225ENST00000585121 AQP1P29972 269 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 RGS8P57771 180 aaPredicted RBP10.91□□□□□ -0.66
SS18-225ENST00000585121 CYLC2Q14093 348 aaPredicted RBP10.91□□□□□ -0.66
SS18-225ENST00000585121 ZNF672Q499Z4 452 aaPredicted RBP10.91□□□□□ -0.66
SS18-225ENST00000585121 ULK3Q6PHR2 472 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 TMEM108Q6UXF1 575 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 CPLX4Q7Z7G2 160 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 RANBP3LQ86VV4 465 aaPredicted RBP10.91□□□□□ -0.66
SS18-225ENST00000585121 SLC30A8Q8IWU4 369 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 LSMEM1Q8N8F7 131 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 POMGNT2Q8NAT1 580 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 OR52N5Q8NH56 324 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 SLC38A4Q969I6 547 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 SLC47A1Q96FL8 570 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 RADILQ96JH8 1075 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 ANKRD27Q96NW4 1050 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 TMEM120AQ9BXJ8 343 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 GSX2Q9BZM3 304 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 IKZF5Q9H5V7 419 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 ZNF385DQ9H6B1 395 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 TESQ9UGI8 421 aaKnown RBP10.91□□□□□ -0.66
SS18-225ENST00000585121 MGAT4BQ9UQ53 548 aa10.91□□□□□ -0.66
SS18-225ENST00000585121 FLNAP21333 2647 aaKnown RBP10.9□□□□□ -0.66
SS18-225ENST00000585121 A0A1B0GWA3 101 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 NPIPB7O75200 414 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 MPGP29372 298 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 NTF4P34130 210 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 RPS5P46782 204 aaKnown RBP10.9□□□□□ -0.66
SS18-225ENST00000585121 PTH2RP49190 550 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 ARFIP2P53365 341 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 MTPNP58546 118 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms