RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 TAAR9Q96RI9 348 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 PRSS27Q9BQR3 290 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 MARVELD1Q9BSK0 173 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 PRR14Q9BWN1 585 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 SLC26A1Q9H2B4 701 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TRIM36Q9NQ86 728 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 HINT3Q9NQE9 182 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 HAO2Q9NYQ3 351 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 GPN3Q9UHW5 284 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 ZNF223Q9UK11 482 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 SLC7A7Q9UM01 511 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 DTX4Q9Y2E6 619 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 CCDC187A0A096LP49 1063 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 A0A1W2PNU3 283 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 PROB1E7EW31 1015 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 GTPBP1O00178 669 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 BHLHE40O14503 412 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 FRS3O43559 492 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 RNF13O43567 381 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 CLPSP04118 112 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 FTH1P19P0C7X4 201 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 NID1P14543 1247 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 GABRA3P34903 492 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 GPR4P46093 362 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 CTBP2P56545 445 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 GALEQ14376 348 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 ASCL5Q7RTU5 278 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 HMGN2P46Q86SG4 172 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 SLC7A5P1Q8MH63 180 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 COX18Q8N8Q8 333 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TEX19Q8NA77 164 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 SYT14Q8NB59 555 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 LILRB4Q8NHJ6 448 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 C16orf52Q8NHV5 167 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TMEM255BQ8WV15 326 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TRIM63Q969Q1 353 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 SAMD8Q96LT4 415 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 SPSB2Q99619 263 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 OR8D2Q9GZM6 311 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 MMP28Q9H239 520 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 OR52D1Q9H346 318 aa13.72□□□□□ -0.21
CDK5RAP3-236ENST00000584991 WDFY3Q8IZQ1 3526 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TFECO14948 347 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 LYRM1O43325 122 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 PLPP2O43688 288 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 HPGDSO60760 199 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 ALOX12BO75342 701 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 STK17BO94768 372 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 NKX2-2O95096 273 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 FAM157BP0CG42 384 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 APEX1P27695 318 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 RFX3P48380 749 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 EMP2P54851 167 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 CLDN20P56880 219 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 BTG1P62324 171 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 PSG6Q00889 435 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 POU4F2Q12837 409 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 IL18Q14116 193 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 ZNHIT3Q15649 155 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 CCNJQ5T5M9 372 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 BICRALQ6AI39 1079 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 NIPAL3Q6P499 406 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 ZNF613Q6PF04 617 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TMEM91Q6ZNR0 172 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TRILQ7L0X0 811 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 OR7G1Q8NGA0 311 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TMEM239Q8WW34 195 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 HOXB13Q92826 284 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 DAZLQ92904 295 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 RNF170Q96K19 258 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 VSTM2LQ96N03 204 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 ZPBPQ9BS86 351 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 LMF2Q9BU23 707 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TMED9Q9BVK6 235 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 GON7Q9BXV9 100 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 HDHD5Q9BXW7 423 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 RERGLQ9H628 205 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 NIPAL2Q9H841 368 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 CMC2Q9NRP2 79 aa13.71□□□□□ -0.21
CDK5RAP3-236ENST00000584991 IGHV3-20A0A0C4DH32 117 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 GXYLT2A0PJZ3 443 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 CDHR4A6H8M9 788 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ORC5O43913 435 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 APOL3O95236 402 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 DDAH2O95865 285 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 CH25HO95992 272 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 MT-ND5P03915 603 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 TCEA1P23193 301 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ACTC1P68032 377 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ACTA1P68133 377 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 EIF3IQ13347 325 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 DCST2Q5T1A1 773 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 VASNQ6EMK4 673 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ANKRD37Q7Z713 158 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 KLBQ86Z14 1044 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 OR5M3Q8NGP4 307 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 OR14A16Q8NHC5 309 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 FANK1Q8TC84 345 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ZNF721Q8TF20 911 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 METTL21AQ8WXB1 218 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms