RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 CPSF7Q8N684 471 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 OR13C2Q8NGS9 318 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 OR2A12Q8NGT7 310 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 OR2L2Q8NH16 312 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 RHEBL1Q8TAI7 183 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 PHLDA1Q8WV24 401 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 ASB5Q8WWX0 329 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 TMEM37Q8WXS4 190 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SLCO4A1Q96BD0 722 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 CXorf40BQ96DE9 158 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 AMDHD1Q96NU7 426 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 PCDHB18PQ96TA0 734 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 GFI1Q99684 422 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 TBCDQ9BTW9 1192 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 NMNAT2Q9BZQ4 307 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 MAP6D1Q9H9H5 199 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 PLAC1Q9HBJ0 212 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 NMRAL1Q9HBL8 299 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 MRPL22Q9NWU5 206 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF490Q9ULM2 529 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 FZR1Q9UM11 496 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 MGAT4AQ9UM21 535 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SATB2Q9UPW6 733 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 FASNP49327 2511 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 AKAP9Q99996 3911 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SCN1AP35498 2009 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 KCNE1BA0A087WTH5 132 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 GLYATL1P3A0A0U1RQE8 302 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 TLCD2A6NGC4 264 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 TUBAL3A6NHL2 446 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 C9J4A7 227 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 E7ESA3 106 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 C16orf97H3BN30 126 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC1A7O00341 560 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 DNALI1O14645 258 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 PRMT5O14744 637 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 AQP9O43315 295 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 FGF17O60258 216 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 NME2P1O60361 137 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 UGT1A9O60656 530 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 KRT6BP04259 564 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 RPLP0P05388 317 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 APRTP07741 180 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC35G4P0C7Q5 338 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 CLUP10909 449 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 HLA-EP13747 358 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 HSD17B1P14061 328 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 S1PR1P21453 382 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 PTGFRP43088 359 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 KRT6CP48668 564 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 DHPSP49366 369 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 STARP49675 285 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SPOCK1Q08629 439 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 P2RY14Q15391 338 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SF3A2Q15428 464 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 CYTH1Q15438 398 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SPHARQ15513 63 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 AGKQ53H12 422 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 NCBP2-AS2Q69YL0 99 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 TIFABQ6ZNK6 161 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 CCDC80Q76M96 950 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 TMEM25Q86YD3 366 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 GCNT2Q8N0V5 402 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 Q8N9G6 341 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 FAM71CQ8NEG0 241 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF548Q8NEK5 533 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 TRPV3Q8NET8 790 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 OR56B2PQ8NGI1 322 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 OR52J3Q8NH60 311 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 OCC1Q8TAD7 63 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 RNASE8Q8TDE3 154 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 LRRC8CQ8TDW0 803 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 RLN3Q8WXF3 142 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SMPDL3AQ92484 453 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 STMN2Q93045 179 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 RAB39BQ96DA2 213 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 CCNL2Q96S94 520 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SECISBP2Q96T21 854 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 EFCAB11Q9BUY7 163 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 NDEL1Q9GZM8 345 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 DRC3Q9H069 523 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 GORASP2Q9H8Y8 452 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 TM9SF3Q9HD45 589 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 NANSQ9NR45 359 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 HEBP1Q9NRV9 189 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 LYARQ9NX58 379 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 QPCTLQ9NXS2 382 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 NUDT4Q9NZJ9 180 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 ATXN10Q9UBB4 475 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 VANGL2Q9ULK5 521 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 PPP2R2CQ9Y2T4 447 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 OR1A2Q9Y585 309 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 MYH10P35580 1976 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 PLXNA2O75051 1894 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 DOCK4Q8N1I0 1966 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 ATG2BQ96BY7 2078 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 A0A075B6Q4 140 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 A0A087WUV0 522 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 A0A087X0T9 212 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 A0A0U1RRA0 63 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms