RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	SLC17A1	Q14916	467 aa		11.76	□□□□□ -0.53
SREBF1-223	ENST00000584760	OR7A5	Q15622	319 aa		11.76	□□□□□ -0.53
SREBF1-223	ENST00000584760	BEX5	Q5H9J7	111 aa		11.76	□□□□□ -0.53
SREBF1-223	ENST00000584760	COQ5	Q5HYK3	327 aa		11.76	□□□□□ -0.53
SREBF1-223	ENST00000584760	P3H2	Q8IVL5	708 aa		11.76	□□□□□ -0.53
SREBF1-223	ENST00000584760	ZNF100	Q8IYN0	542 aa		11.76	□□□□□ -0.53
SREBF1-223	ENST00000584760	LSMEM1	Q8N8F7	131 aa		11.76	□□□□□ -0.53
SREBF1-223	ENST00000584760	C10orf82	Q8WW14	230 aa		11.76	□□□□□ -0.53
SREBF1-223	ENST00000584760	ZNF607	Q96SK3	696 aa		11.76	□□□□□ -0.53
SREBF1-223	ENST00000584760	NAA11	Q9BSU3	229 aa	Predicted RBP	11.76	□□□□□ -0.53
SREBF1-223	ENST00000584760	C12orf10	Q9HB07	376 aa		11.76	□□□□□ -0.53
SREBF1-223	ENST00000584760	KLHL14	Q9P2G3	628 aa		11.76	□□□□□ -0.53
SREBF1-223	ENST00000584760	MALT1	Q9UDY8	824 aa		11.76	□□□□□ -0.53
SREBF1-223	ENST00000584760	TES	Q9UGI8	421 aa	Known RBP	11.76	□□□□□ -0.53
SREBF1-223	ENST00000584760	NOSIP	Q9Y314	301 aa	Known RBP	11.76	□□□□□ -0.53
SREBF1-223	ENST00000584760	FLVCR1	Q9Y5Y0	555 aa		11.76	□□□□□ -0.53
SREBF1-223	ENST00000584760	NSD1	Q96L73	2696 aa	Predicted RBP	11.76	□□□□□ -0.53
SREBF1-223	ENST00000584760	JMJD1C	Q15652	2540 aa		11.76	□□□□□ -0.53
SREBF1-223	ENST00000584760		A0A1B0GWA3	101 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	PRORSD1P	A6NEY8	169 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	FTCDNL1	E5RQL4	147 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	FZD7	O75084	574 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	SERPINB7	O75635	380 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	LYZL6	O75951	148 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	AKR7A3	O95154	331 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	IGHV1-2	P23083	117 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	PCGF2	P35227	344 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	MDH1	P40925	334 aa	Known RBP	11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	GZMM	P51124	257 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	EGR4	Q05215	589 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	TAB1	Q15750	504 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760		Q5PR19	223 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	OTUD3	Q5T2D3	398 aa	Predicted RBP	11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	C1orf140	Q5VVS0	124 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	FBXW9	Q5XUX1	488 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	REP15	Q6BDI9	236 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	BHLHA15	Q7RTS1	189 aa	Predicted RBP	11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	WFDC8	Q8IUA0	241 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	ARMC8	Q8IUR7	673 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	TMEM99	Q8N816	258 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	STK35	Q8TDR2	534 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	APH1A	Q96BI3	265 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	COX4I2	Q96KJ9	171 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	WFDC6	Q9BQY6	131 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	TMEM204	Q9BSN7	226 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	PTDSS2	Q9BVG9	487 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	SLC9A8	Q9Y2E8	581 aa		11.75	□□□□□ -0.53
SREBF1-223	ENST00000584760	CAD	P27708	2225 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	IGKV1D-42	A0A075B6H8	117 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	ELOA3D	A6NLF2	546 aa	Predicted RBP	11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	BBIP1	A8MTZ0	92 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	MRAS	O14807	208 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	ATP8B1	O43520	1251 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	TPST2	O60704	377 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	AHSA1	O95433	338 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	IGHV3-9	P01782	118 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	OPN1SW	P03999	348 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	CRYBA2	P53672	197 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	NR1H2	P55055	460 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	RGS8	P57771	180 aa	Predicted RBP	11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	NCALD	P61601	193 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	MAPRE2	Q15555	327 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	ELOA3B	Q3SY89	546 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	NANOGP8	Q6NSW7	305 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	CASP12	Q6UXS9	341 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	CXXC5	Q7LFL8	322 aa	Known RBP	11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	SNX32	Q86XE0	403 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	SLC30A8	Q8IWU4	369 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	SMYD1	Q8NB12	490 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	ELOA3	Q8NG57	546 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	GPR32P1	Q8NGA4	272 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	OR9K2	Q8NGE7	335 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	OR8J3	Q8NGG0	315 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	OR52E4	Q8NGH9	312 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	OR10A6	Q8NH74	314 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	SPATA3	Q8NHX4	192 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	DNAJA4	Q8WW22	397 aa	Predicted RBP	11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	NANOS1	Q8WY41	292 aa	Known RBP	11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	TMEM45B	Q96B21	275 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	LRRC58	Q96CX6	371 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	PLPPR2	Q96GM1	343 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760		Q96MF0	132 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	ARHGDIG	Q99819	225 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	USB1	Q9BQ65	265 aa	Known RBP	11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	SF3B5	Q9BWJ5	86 aa	Known RBP	11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	PRR14	Q9BWN1	585 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	TRIM2	Q9C040	744 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	NANOG	Q9H9S0	305 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760	ADPRHL2	Q9NX46	363 aa		11.74	□□□□□ -0.53
SREBF1-223	ENST00000584760		A0A0B4J2E0	115 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760		A0A1B0GX12	115 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	INAFM1	C9JVW0	142 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	PDLIM1	O00151	329 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	SMPD2	O60906	423 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	MRPL33	O75394	65 aa	Known RBP	11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	NPPA	P01160	153 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	PNMT	P11086	282 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	PPP2R2B	Q00005	443 aa		11.73	□□□□□ -0.53
SREBF1-223	ENST00000584760	CYLC2	Q14093	348 aa	Predicted RBP	11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms