RNA–Protein interactions for RNA: ENST00000584620.5

PGAP3-209, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 3

Gene PGAP3, Length 804 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-209ENST00000584620 ATG16L1Q676U5 607 aa9.45□□□□□ -0.9
PGAP3-209ENST00000584620 PAQR6Q6TCH4 344 aa9.45□□□□□ -0.9
PGAP3-209ENST00000584620 CLEC2AQ6UVW9 174 aa9.45□□□□□ -0.9
PGAP3-209ENST00000584620 C17orf78Q8N4C9 275 aa9.45□□□□□ -0.9
PGAP3-209ENST00000584620 TMEM99Q8N816 258 aa9.45□□□□□ -0.9
PGAP3-209ENST00000584620 C1orf162Q8NEQ5 155 aaPredicted RBP9.45□□□□□ -0.9
PGAP3-209ENST00000584620 PNPT1Q8TCS8 783 aaKnown RBP9.45□□□□□ -0.9
PGAP3-209ENST00000584620 C10orf105Q8TEF2 133 aa9.45□□□□□ -0.9
PGAP3-209ENST00000584620 WDR60Q8WVS4 1066 aa9.45□□□□□ -0.9
PGAP3-209ENST00000584620 PMM1Q92871 262 aa9.45□□□□□ -0.9
PGAP3-209ENST00000584620 TMEM45BQ96B21 275 aa9.45□□□□□ -0.9
PGAP3-209ENST00000584620 BOD1Q96IK1 185 aa9.45□□□□□ -0.9
PGAP3-209ENST00000584620 PANX1Q96RD7 426 aa9.45□□□□□ -0.9
PGAP3-209ENST00000584620 NAA11Q9BSU3 229 aaPredicted RBP9.45□□□□□ -0.9
PGAP3-209ENST00000584620 SHARPINQ9H0F6 387 aa9.45□□□□□ -0.9
PGAP3-209ENST00000584620 MANSC1Q9H8J5 431 aa9.45□□□□□ -0.9
PGAP3-209ENST00000584620 MTHFD2LQ9H903 347 aaPredicted RBP9.45□□□□□ -0.9
PGAP3-209ENST00000584620 THAP1Q9NVV9 213 aa9.45□□□□□ -0.9
PGAP3-209ENST00000584620 PARPBPQ9NWS1 579 aa9.45□□□□□ -0.9
PGAP3-209ENST00000584620 UPB1Q9UBR1 384 aa9.45□□□□□ -0.9
PGAP3-209ENST00000584620 CHST2Q9Y4C5 530 aa9.45□□□□□ -0.9
PGAP3-209ENST00000584620 GPR45Q9Y5Y3 372 aa9.45□□□□□ -0.9
PGAP3-209ENST00000584620 YLPM1P49750 1951 aaKnown RBP9.44□□□□□ -0.9
PGAP3-209ENST00000584620 CDHR4A6H8M9 788 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 AQP7P3A6NL99 342 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 HMGB1P1B2RPK0 211 aaPredicted RBP9.44□□□□□ -0.9
PGAP3-209ENST00000584620 ATP6V1G2-DDX39BF2Z307 99 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 AKR7A3O95154 331 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 GKN3PP0CG01 181 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 MAP2K6P52564 334 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 BST1Q10588 318 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 BNIP2Q12982 314 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 CEACAM7Q14002 265 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 SWI5Q1ZZU3 235 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 HIKESHIQ53FT3 197 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 OTUD3Q5T2D3 398 aaPredicted RBP9.44□□□□□ -0.9
PGAP3-209ENST00000584620 ZNF621Q6ZSS3 439 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 IL17RELQ6ZVW7 336 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 VRK2Q86Y07 508 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 OR9K2Q8NGE7 335 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 MGARPQ8TDB4 240 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 FAM168AQ92567 244 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 OR52E6Q96RD3 313 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 WDR55Q9H6Y2 383 aaPredicted RBP9.44□□□□□ -0.9
PGAP3-209ENST00000584620 AMDHD2Q9Y303 409 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 ATP23Q9Y6H3 246 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 DSPPQ9NZW4 1301 aa9.44□□□□□ -0.9
PGAP3-209ENST00000584620 KLF11O14901 512 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 NPIPB7O75200 414 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 SNNO75324 88 aaPredicted RBP9.43□□□□□ -0.9
PGAP3-209ENST00000584620 GPIP06744 558 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 DBIP07108 87 aaKnown RBP9.43□□□□□ -0.9
PGAP3-209ENST00000584620 IGHV4-31P0DP07 118 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 NR2F1P10589 423 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 PRG2P13727 222 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 ETFAP13804 333 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 SLC25A16P16260 332 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 IL7RP16871 459 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 EGR1P18146 543 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 EPHA3P29320 983 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 APOBEC3AP31941 199 aaPredicted RBP9.43□□□□□ -0.9
PGAP3-209ENST00000584620 THBS2P35442 1172 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 EFNA4P52798 201 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 TXNL4AP83876 142 aaKnown RBP9.43□□□□□ -0.9
PGAP3-209ENST00000584620 TGFBR3Q03167 851 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 LGALS3BPQ08380 585 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 OR7A5Q15622 319 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 GSTA3Q16772 222 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 C12orf54Q6X4T0 127 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 ZNF836Q6ZNA1 936 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 LINGO2Q7L985 606 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 AAED1Q7RTV5 226 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 SPATA19Q7Z5L4 167 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 DEPDC4Q8N2C3 294 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 CLIP4Q8N3C7 705 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 TRIML2Q8N7C3 387 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 AURKBQ96GD4 344 aaPredicted RBP9.43□□□□□ -0.9
PGAP3-209ENST00000584620 SF3B5Q9BWJ5 86 aaKnown RBP9.43□□□□□ -0.9
PGAP3-209ENST00000584620 FKRPQ9H9S5 495 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 MOKQ9UQ07 419 aa9.43□□□□□ -0.9
PGAP3-209ENST00000584620 IGHV1-18A0A0C4DH31 117 aa9.42□□□□□ -0.9
PGAP3-209ENST00000584620 VWC2LB2RUY7 222 aa9.42□□□□□ -0.9
PGAP3-209ENST00000584620 SLCO1B7G3V0H7 640 aa9.42□□□□□ -0.9
PGAP3-209ENST00000584620 FRS3O43559 492 aa9.42□□□□□ -0.9
PGAP3-209ENST00000584620 LGI1O95970 557 aa9.42□□□□□ -0.9
PGAP3-209ENST00000584620 TFPTP0C1Z6 253 aa9.42□□□□□ -0.9
PGAP3-209ENST00000584620 SRD5A1P18405 259 aa9.42□□□□□ -0.9
PGAP3-209ENST00000584620 CDH2P19022 906 aaPredicted RBP9.42□□□□□ -0.9
PGAP3-209ENST00000584620 CXCR1P25024 350 aa9.42□□□□□ -0.9
PGAP3-209ENST00000584620 SELENOPP49908 381 aa9.42□□□□□ -0.9
PGAP3-209ENST00000584620 ANXA11P50995 505 aaKnown RBP9.42□□□□□ -0.9
PGAP3-209ENST00000584620 PRPS1P60891 318 aa9.42□□□□□ -0.9
PGAP3-209ENST00000584620 GNA13Q14344 377 aa9.42□□□□□ -0.9
PGAP3-209ENST00000584620 GTDC1Q4AE62 458 aa9.42□□□□□ -0.9
PGAP3-209ENST00000584620 TTMPQ5BVD1 217 aa9.42□□□□□ -0.9
PGAP3-209ENST00000584620 C1QTNF12Q5T7M4 302 aa9.42□□□□□ -0.9
PGAP3-209ENST00000584620 CREB3L2Q70SY1 520 aa9.42□□□□□ -0.9
PGAP3-209ENST00000584620 EPHX4Q8IUS5 362 aa9.42□□□□□ -0.9
PGAP3-209ENST00000584620 PEX5LQ8IYB4 626 aa9.42□□□□□ -0.9
PGAP3-209ENST00000584620 ZNF440Q8IYI8 595 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms