RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 SLC34A1Q06495 639 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 C3AR1Q16581 482 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 C1orf94Q6P1W5 598 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 PGBD2Q6P3X8 592 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 TMPRSS11FQ6ZWK6 438 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 ATG16L2Q8NAA4 619 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 OSTF1Q92882 214 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 CPNE4Q96A23 557 aaPredicted RBP16.44■□□□□ 0.22
RFFL-211ENST00000584541 EME1Q96AY2 570 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 ADGRG7Q96K78 797 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 PSD2Q9BQI7 771 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 NAA11Q9BSU3 229 aaPredicted RBP16.44■□□□□ 0.22
RFFL-211ENST00000584541 OSBPL10Q9BXB5 764 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 COQ10BQ9H8M1 238 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 ALKBH4Q9NXW9 302 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 ZNF229Q9UJW7 825 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 CORINQ9Y5Q5 1042 aa16.44■□□□□ 0.22
RFFL-211ENST00000584541 TLN1Q9Y490 2541 aaKnown RBP16.43■□□□□ 0.22
RFFL-211ENST00000584541 EIF4E1BA6NMX2 242 aaKnown RBP16.43■□□□□ 0.22
RFFL-211ENST00000584541 AHRRA9YTQ3 701 aa16.43■□□□□ 0.22
RFFL-211ENST00000584541 H0YC42 278 aa16.43■□□□□ 0.22
RFFL-211ENST00000584541 CXCL13O43927 109 aa16.43■□□□□ 0.22
RFFL-211ENST00000584541 EIF1BO60739 113 aaKnown RBP16.43■□□□□ 0.22
RFFL-211ENST00000584541 FUT1P19526 365 aa16.43■□□□□ 0.22
RFFL-211ENST00000584541 CBLP22681 906 aa16.43■□□□□ 0.22
RFFL-211ENST00000584541 SLC9A3P48764 834 aa16.43■□□□□ 0.22
RFFL-211ENST00000584541 TPD52P55327 224 aaPredicted RBP16.43■□□□□ 0.22
RFFL-211ENST00000584541 C19orf57Q0VDD7 668 aa16.43■□□□□ 0.22
RFFL-211ENST00000584541 TAF11Q15544 211 aa16.43■□□□□ 0.22
RFFL-211ENST00000584541 TRIP10Q15642 601 aa16.43■□□□□ 0.22
RFFL-211ENST00000584541 OTUD3Q5T2D3 398 aaPredicted RBP16.43■□□□□ 0.22
RFFL-211ENST00000584541 ZNF770Q6IQ21 691 aaPredicted RBP16.43■□□□□ 0.22
RFFL-211ENST00000584541 ZER1Q7Z7L7 766 aa16.43■□□□□ 0.22
RFFL-211ENST00000584541 LSRQ86X29 649 aaPredicted RBP16.43■□□□□ 0.22
RFFL-211ENST00000584541 HS3ST5Q8IZT8 346 aa16.43■□□□□ 0.22
RFFL-211ENST00000584541 ST6GALNAC3Q8NDV1 305 aa16.43■□□□□ 0.22
RFFL-211ENST00000584541 OR5M9Q8NGP3 310 aa16.43■□□□□ 0.22
RFFL-211ENST00000584541 FAM57AQ8TBR7 257 aa16.43■□□□□ 0.22
RFFL-211ENST00000584541 MOGAT1Q96PD6 335 aa16.43■□□□□ 0.22
RFFL-211ENST00000584541 FEVQ99581 238 aa16.43■□□□□ 0.22
RFFL-211ENST00000584541 CIB1Q99828 191 aa16.43■□□□□ 0.22
RFFL-211ENST00000584541 GABARAPL1Q9H0R8 117 aa16.43■□□□□ 0.22
RFFL-211ENST00000584541 MCTS1Q9ULC4 181 aaKnown RBP16.43■□□□□ 0.22
RFFL-211ENST00000584541 SVILO95425 2214 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 FIGNL2A6NMB9 653 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 FTCDNL1E5RQL4 147 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 PRRG2O14669 202 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 ADAP00813 363 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 GASTP01350 101 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 GABRA1P14867 456 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 MAKP20794 623 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 GSTM3P21266 225 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 ENPP1P22413 925 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 PRKACGP22612 351 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 FPR3P25089 353 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 GRPRP30550 384 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 TSPAN31Q12999 210 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 GXYLT1Q4G148 440 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 PPP4R4Q6NUP7 873 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 ZNF585AQ6P3V2 769 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 SLC46A3Q7Z3Q1 461 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 FGD2Q7Z6J4 655 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 OAFQ86UD1 273 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 MEX3DQ86XN8 651 aaKnown RBP16.42■□□□□ 0.22
RFFL-211ENST00000584541 SCAIQ8N9R8 606 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 ZPLD1Q8TCW7 415 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 LIPHQ8WWY8 451 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 DNAJC9Q8WXX5 260 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 GTPBP3Q969Y2 492 aaKnown RBP16.42■□□□□ 0.22
RFFL-211ENST00000584541 BBC3Q96PG8 261 aaPredicted RBP16.42■□□□□ 0.22
RFFL-211ENST00000584541 DGCR6LQ9BY27 220 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 PRRG4Q9BZD6 226 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 PNPLA3Q9NST1 481 aa16.42■□□□□ 0.22
RFFL-211ENST00000584541 NKX1-2Q9UD57 310 aaPredicted RBP16.42■□□□□ 0.22
RFFL-211ENST00000584541 BOD1L1Q8NFC6 3051 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 UNC119BA6NIH7 251 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 LRRN3E7EW58 273 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 ZNHIT1O43257 154 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 WDR1O75083 606 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 OR6A2O95222 327 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 POU2F1P14859 743 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 PTGER4P35408 488 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 GSSP48637 474 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 LTBQ06643 244 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 PMS2P3Q13401 168 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 ANKDD1AQ495B1 522 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 PAQR6Q6TCH4 344 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 ZBTB49Q6ZSB9 765 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 NANOGNBQ7Z5D8 188 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 CD163Q86VB7 1156 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 CHERPQ8IWX8 916 aaKnown RBP16.41■□□□□ 0.22
RFFL-211ENST00000584541 OR5J2Q8NH18 312 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 ZNF845Q96IR2 970 aaPredicted RBP16.41■□□□□ 0.22
RFFL-211ENST00000584541 RBM4BQ9BQ04 359 aaKnown RBP16.41■□□□□ 0.22
RFFL-211ENST00000584541 TUBA1CQ9BQE3 449 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 RBM4Q9BWF3 364 aaKnown RBP16.41■□□□□ 0.22
RFFL-211ENST00000584541 SRXN1Q9BYN0 137 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 NDEL1Q9GZM8 345 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 CHST11Q9NPF2 352 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 MRPL39Q9NYK5 338 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms