RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 PLK3Q9H4B4 646 aa11.71□□□□□ -0.53
CCDC57-218ENST00000583593 SEC61A2Q9H9S3 476 aa11.71□□□□□ -0.53
CCDC57-218ENST00000583593 OBP2BQ9NPH6 170 aa11.71□□□□□ -0.53
CCDC57-218ENST00000583593 CRNNQ9UBG3 495 aaPredicted RBP11.71□□□□□ -0.53
CCDC57-218ENST00000583593 LRP5LA4QPB2 252 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 AQP7P3A6NL99 342 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 B9A039 149 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 HAX1O00165 279 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 IL2RGP31785 369 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 CHI3L1P36222 383 aaPredicted RBP11.7□□□□□ -0.54
CCDC57-218ENST00000583593 CDKN2CP42773 168 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 SELENOPP49908 381 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 HPCAP84074 193 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 NAAAQ02083 359 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 BNIP2Q12982 314 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 EFNB3Q15768 340 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 CARTPTQ16568 116 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 ZSWIM7Q19AV6 140 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 CR1LQ2VPA4 569 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 MRPL2Q5T653 305 aaKnown RBP11.7□□□□□ -0.54
CCDC57-218ENST00000583593 ANKRD16Q6P6B7 361 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 KLHL24Q6TFL4 600 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 LRRC74BQ6ZQY2 392 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 CREB3L2Q70SY1 520 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 SPATA19Q7Z5L4 167 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 WDR60Q8WVS4 1066 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 BCL2L2Q92843 193 aaPredicted RBP11.7□□□□□ -0.54
CCDC57-218ENST00000583593 C1orf159Q96HA4 380 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 TEX37Q96LM6 180 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 CCDC115Q96NT0 180 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 KATNB1Q9BVA0 655 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 MYOZ1Q9NP98 299 aaPredicted RBP11.7□□□□□ -0.54
CCDC57-218ENST00000583593 RLIMQ9NVW2 624 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 BTNL2Q9UIR0 455 aa11.7□□□□□ -0.54
CCDC57-218ENST00000583593 CFAP73A6NFT4 308 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 UPK3AO75631 287 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 PDE5AO76074 875 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 STAMBPO95630 424 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 IGLV1-44P01699 117 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 GPIP06744 558 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 IGFBP1P08833 259 aaPredicted RBP11.69□□□□□ -0.54
CCDC57-218ENST00000583593 OR4A8P0C604 315 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 CECR9P0C854 216 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 GKN3PP0CG01 181 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 IL7RP16871 459 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 ACAA2P42765 397 aaKnown RBP11.69□□□□□ -0.54
CCDC57-218ENST00000583593 TUBA1BP68363 451 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 TUBA4AP68366 448 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 SQLEQ14534 574 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 FAM174BQ3ZCQ3 159 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 IQCCQ4KMZ1 466 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 COX20Q5RI15 118 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 VHLLQ6RSH7 139 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 TUBA1AQ71U36 451 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 SLC46A3Q7Z3Q1 461 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 GPAT4Q86UL3 456 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 MYPOPQ86VE0 399 aaPredicted RBP11.69□□□□□ -0.54
CCDC57-218ENST00000583593 EPHX4Q8IUS5 362 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 NUDCD3Q8IVD9 361 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 ZCCHC24Q8N2G6 241 aaKnown RBP11.69□□□□□ -0.54
CCDC57-218ENST00000583593 VPS37AQ8NEZ2 397 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 PKNOX2Q96KN3 472 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 ALKBH3Q96Q83 286 aaPredicted RBP11.69□□□□□ -0.54
CCDC57-218ENST00000583593 SORT1Q99523 831 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 PIF1Q9H611 641 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 MTHFD2LQ9H903 347 aaPredicted RBP11.69□□□□□ -0.54
CCDC57-218ENST00000583593 TMEM45AQ9NWC5 275 aa11.69□□□□□ -0.54
CCDC57-218ENST00000583593 A0A096LPE4 126 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 ARPC4-TTLL3A0A0A6YYG9 625 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 A0A1W2PPZ6 126 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 TMEM129A0AVI4 362 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 WDR91A4D1P6 747 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 CDHR4A6H8M9 788 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 CCDC154A6NI56 674 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 E9PBE3 544 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 LILRA1O75019 489 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 NPIPB7O75200 414 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 CRYAAP02489 173 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 PGRP06401 933 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 DBIP07108 87 aaKnown RBP11.68□□□□□ -0.54
CCDC57-218ENST00000583593 HNF1AP20823 631 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 CXCR1P25024 350 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 GIFP27352 417 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 IL12AP29459 219 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 S100A3P33764 101 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 PPOXP50336 477 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 IDH3GP51553 393 aaPredicted RBP11.68□□□□□ -0.54
CCDC57-218ENST00000583593 ABCE1P61221 599 aaKnown RBP11.68□□□□□ -0.54
CCDC57-218ENST00000583593 HGFACQ04756 655 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 GSTA3Q16772 222 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 C3orf36Q3SXR2 165 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 TMEM225Q6GV28 225 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 ABHD12BQ7Z5M8 362 aaPredicted RBP11.68□□□□□ -0.54
CCDC57-218ENST00000583593 VRK2Q86Y07 508 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 MAGEE2Q8TD90 523 aaPredicted RBP11.68□□□□□ -0.54
CCDC57-218ENST00000583593 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.68□□□□□ -0.544e-7■■■■■ 58.1
CCDC57-218ENST00000583593 DOK1Q99704 481 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 ADPRHL2Q9NX46 363 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 CHST2Q9Y4C5 530 aa11.68□□□□□ -0.54
CCDC57-218ENST00000583593 TENM1Q9UKZ4 2725 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms