RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 CLCA1A8K7I4 914 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 H0YC42 278 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 ADAP00813 363 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 OPN1LWP04000 364 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 CDH2P19022 906 aaPredicted RBP13.93□□□□□ -0.18
SS18-216ENST00000580751 EIF1AXP47813 144 aaKnown RBP13.93□□□□□ -0.18
SS18-216ENST00000580751 RAD23AP54725 363 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 TPD52P55327 224 aaPredicted RBP13.93□□□□□ -0.18
SS18-216ENST00000580751 CLDN15P56746 228 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 COX10Q12887 443 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 EXOC3L2Q2M3D2 409 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 CTU2Q2VPK5 515 aaKnown RBP13.93□□□□□ -0.18
SS18-216ENST00000580751 ELOA3BQ3SY89 546 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 ALG10BQ5I7T1 473 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 FGD3Q5JSP0 725 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 NSUN5P2Q63ZY6 315 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 HBMQ6B0K9 141 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 TMEM211Q6ICI0 200 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 ZNF770Q6IQ21 691 aaPredicted RBP13.93□□□□□ -0.18
SS18-216ENST00000580751 LINC00114Q6XXX2 140 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 MBOAT2Q6ZWT7 520 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 RRM2BQ7LG56 351 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 ATG4DQ86TL0 474 aaPredicted RBP13.93□□□□□ -0.18
SS18-216ENST00000580751 ELOA3Q8NG57 546 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 OR10G2Q8NGC3 310 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 OR10D3Q8NH80 312 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 ADGRG7Q96K78 797 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 TRIB1Q96RU8 372 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 ZNF184Q99676 751 aaPredicted RBP13.93□□□□□ -0.18
SS18-216ENST00000580751 PRR14Q9BWN1 585 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 DGCR6LQ9BY27 220 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 CALHM2Q9HA72 323 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 ZNF556Q9HAH1 456 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 ZNF175Q9Y473 711 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 ORC6Q9Y5N6 252 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 A0A087WUJ7 227 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 A0A0J9YW62 118 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 TRBV4-1A0A0J9YWV2 114 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 TMEM72A0PK05 275 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 CD8B2A6NJW9 211 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 SOCS2O14508 198 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 EI24O14681 340 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 TNFSF11O14788 317 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 LYPD3O95274 346 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 TFPIP10646 304 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 FCGR2AP12318 317 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 CCNA2P20248 432 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 SHC1P29353 583 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 IST1P53990 364 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 SGCBQ16585 318 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 LRRC36Q1X8D7 754 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 OTUD3Q5T2D3 398 aaPredicted RBP13.92□□□□□ -0.18
SS18-216ENST00000580751 KDM4DQ6B0I6 523 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 RTL6Q6ICC9 239 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 PODNL1Q6PEZ8 512 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 C5orf46Q6UWT4 87 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 CD300LDQ6UXZ3 194 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 RPTNQ6XPR3 784 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 TMEM179BQ7Z7N9 219 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 ADGRE4PQ86SQ3 457 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 TSPYL5Q86VY4 417 aaPredicted RBP13.92□□□□□ -0.18
SS18-216ENST00000580751 PARP8Q8N3A8 854 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 OR52J3Q8NH60 311 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 CPNE4Q96A23 557 aaPredicted RBP13.92□□□□□ -0.18
SS18-216ENST00000580751 OR5B2Q96R09 309 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 UCN2Q96RP3 112 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 DMRTA2Q96SC8 542 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 SLC29A1Q99808 456 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 PRSS27Q9BQR3 290 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 TTYH2Q9BSA4 534 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 TMEM43Q9BTV4 400 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 RHCGQ9UBD6 479 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 MCTS1Q9ULC4 181 aaKnown RBP13.92□□□□□ -0.18
SS18-216ENST00000580751 SLC7A7Q9UM01 511 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 TMEM5Q9Y2B1 443 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 HDGFL3Q9Y3E1 203 aa13.92□□□□□ -0.18
SS18-216ENST00000580751 DIDO1Q9BTC0 2240 aaKnown RBP13.92□□□□□ -0.18
SS18-216ENST00000580751 A0A087WUU8 490 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 SLC22A20A6NK97 555 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 A8MVM7 634 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 PDLIM1O00151 329 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 CXCL13O43927 109 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 THY1P04216 161 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 GSTM3P21266 225 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 CBLP22681 906 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 CARD18P57730 90 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 CSNK2A1P68400 391 aaPredicted RBP13.91□□□□□ -0.18
SS18-216ENST00000580751 C1orf94Q6P1W5 598 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 IZUMO2Q6UXV1 221 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 ZNF730Q6ZMV8 503 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 ATG16L2Q8NAA4 619 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 OR4K5Q8NGD3 323 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 RNF217Q8TC41 542 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 MAGEE2Q8TD90 523 aaPredicted RBP13.91□□□□□ -0.18
SS18-216ENST00000580751 TMEM239Q8WW34 195 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 WNT2BQ93097 391 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 TM9SF2Q99805 663 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 POTEKPQ9BYX7 375 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 OR11A1Q9GZK7 315 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 SMPD3Q9NY59 655 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms