RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 CADM1Q9BY67 442 aaKnown RBP8.85□□□□□ -0.99
GGA3-209ENST00000580646 SLC19A3Q9BZV2 496 aa8.85□□□□□ -0.99
GGA3-209ENST00000580646 FAM192AQ9GZU8 254 aa8.85□□□□□ -0.99
GGA3-209ENST00000580646 GP6Q9HCN6 339 aa8.85□□□□□ -0.99
GGA3-209ENST00000580646 SELENONQ9NZV5 590 aa8.85□□□□□ -0.99
GGA3-209ENST00000580646 ZNF629Q9UEG4 869 aaPredicted RBP8.85□□□□□ -0.99
GGA3-209ENST00000580646 PACSIN3Q9UKS6 424 aa8.85□□□□□ -0.99
GGA3-209ENST00000580646 MCTS1Q9ULC4 181 aaKnown RBP8.85□□□□□ -0.99
GGA3-209ENST00000580646 PAIP2BQ9ULR5 123 aaKnown RBP8.85□□□□□ -0.99
GGA3-209ENST00000580646 OTOGQ6ZRI0 2925 aa8.85□□□□□ -0.99
GGA3-209ENST00000580646 HTR3EA5X5Y0 456 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 SLC22A20A6NK97 555 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 ELOA3DA6NLF2 546 aaPredicted RBP8.84□□□□□ -0.99
GGA3-209ENST00000580646 AQP12BA6NM10 295 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 H0YC42 278 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 ACOT8O14734 319 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 TNFSF11O14788 317 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 EIF1BO60739 113 aaKnown RBP8.84□□□□□ -0.99
GGA3-209ENST00000580646 RCBTB2O95199 551 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 LYPD3O95274 346 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 STAMBPO95630 424 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 IL18BPO95998 194 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 CRHP06850 196 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 ITGA2P17301 1181 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 BMP5P22003 454 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 SHC1P29353 583 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 SFTPDP35247 375 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 RBM34P42696 430 aaKnown RBP8.84□□□□□ -0.99
GGA3-209ENST00000580646 EIF1AXP47813 144 aaKnown RBP8.84□□□□□ -0.99
GGA3-209ENST00000580646 DIO1P49895 249 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 HCFC1P51610 2035 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 AGFG1P52594 562 aaKnown RBP8.84□□□□□ -0.99
GGA3-209ENST00000580646 CDH12P55289 794 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 TPD52P55327 224 aaPredicted RBP8.84□□□□□ -0.99
GGA3-209ENST00000580646 CARD18P57730 90 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 TAS2R41P59536 307 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 SRYQ05066 204 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 MYBPHQ13203 477 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 SGCBQ16585 318 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 ZNF239Q16600 458 aaKnown RBP8.84□□□□□ -0.99
GGA3-209ENST00000580646 ELOA3BQ3SY89 546 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 GTF2IRD2BQ6EKJ0 949 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 POMZP3Q6PJE2 187 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 FKBP9P1Q75LS8 142 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 ASRGL1Q7L266 308 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 VTCN1Q7Z7D3 282 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 GTF2IRD2Q86UP8 949 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 RBM45Q8IUH3 476 aaKnown RBP8.84□□□□□ -0.99
GGA3-209ENST00000580646 AQP12AQ8IXF9 295 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 OFCC1Q8IZS5 231 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 SLC43A2Q8N370 569 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 RELL2Q8NC24 303 aaPredicted RBP8.84□□□□□ -0.99
GGA3-209ENST00000580646 ELOA3Q8NG57 546 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 OSTF1Q92882 214 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 MCUR1Q96AQ8 359 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 EPYCQ99645 322 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 TRIM15Q9C019 465 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 AMBRA1Q9C0C7 1298 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 ANKRD19PQ9H560 264 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 MAGIXQ9H6Y5 334 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 TMEM185BQ9H7F4 350 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 RNF122Q9H9V4 155 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 GLRX2Q9NS18 164 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 KCNN3Q9UGI6 736 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 A4GNTQ9UNA3 340 aa8.84□□□□□ -0.99
GGA3-209ENST00000580646 SETD2Q9BYW2 2564 aaPredicted RBP8.83□□□□□ -1
GGA3-209ENST00000580646 A0A1W2PNR3 127 aa8.83□□□□□ -1
GGA3-209ENST00000580646 TCRBV5S2A0A599 114 aa8.83□□□□□ -1
GGA3-209ENST00000580646 CPSF4LA6NMK7 179 aaKnown RBP8.83□□□□□ -1
GGA3-209ENST00000580646 SULT2B1O00204 365 aa8.83□□□□□ -1
GGA3-209ENST00000580646 OR2T1O43869 369 aa8.83□□□□□ -1
GGA3-209ENST00000580646 CXCL13O43927 109 aa8.83□□□□□ -1
GGA3-209ENST00000580646 ATP6V1G1O75348 118 aa8.83□□□□□ -1
GGA3-209ENST00000580646 PDE5AO76074 875 aa8.83□□□□□ -1
GGA3-209ENST00000580646 PRKD3O94806 890 aa8.83□□□□□ -1
GGA3-209ENST00000580646 SYNGR4O95473 234 aa8.83□□□□□ -1
GGA3-209ENST00000580646 THY1P04216 161 aa8.83□□□□□ -1
GGA3-209ENST00000580646 GPIP06744 558 aa8.83□□□□□ -1
GGA3-209ENST00000580646 UMPSP11172 480 aa8.83□□□□□ -1
GGA3-209ENST00000580646 RHCEP18577 417 aa8.83□□□□□ -1
GGA3-209ENST00000580646 ATP6V1B2P21281 511 aa8.83□□□□□ -1
GGA3-209ENST00000580646 CTSSP25774 331 aa8.83□□□□□ -1
GGA3-209ENST00000580646 UQCRC1P31930 480 aa8.83□□□□□ -1
GGA3-209ENST00000580646 IDUAP35475 653 aa8.83□□□□□ -1
GGA3-209ENST00000580646 MSX2P35548 267 aaPredicted RBP8.83□□□□□ -1
GGA3-209ENST00000580646 MAGEA2P43356 314 aa8.83□□□□□ -1
GGA3-209ENST00000580646 OR1E2P47887 323 aa8.83□□□□□ -1
GGA3-209ENST00000580646 ASCL1P50553 236 aa8.83□□□□□ -1
GGA3-209ENST00000580646 SLC35A1P78382 337 aa8.83□□□□□ -1
GGA3-209ENST00000580646 ELF3P78545 371 aaPredicted RBP8.83□□□□□ -1
GGA3-209ENST00000580646 H3F3AP84243 136 aa8.83□□□□□ -1
GGA3-209ENST00000580646 MS4A2Q01362 244 aa8.83□□□□□ -1
GGA3-209ENST00000580646 EGR4Q05215 589 aa8.83□□□□□ -1
GGA3-209ENST00000580646 ST3GAL3Q11203 375 aa8.83□□□□□ -1
GGA3-209ENST00000580646 MFSD13AQ14CX5 517 aa8.83□□□□□ -1
GGA3-209ENST00000580646 PDK3Q15120 406 aa8.83□□□□□ -1
GGA3-209ENST00000580646 PON3Q15166 354 aa8.83□□□□□ -1
GGA3-209ENST00000580646 RNPS1Q15287 305 aaKnown RBP8.83□□□□□ -1
GGA3-209ENST00000580646 GUSBP1Q15486 140 aa8.83□□□□□ -1
GGA3-209ENST00000580646 FBXL19-AS1Q494R0 122 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms