RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 CBLP22681 906 aa17.29■□□□□ 0.36
SS18-209ENST00000578595 SLC7A2P52569 658 aa17.29■□□□□ 0.36
SS18-209ENST00000578595 TSC22D1Q15714 1073 aa17.29■□□□□ 0.36
SS18-209ENST00000578595 NRF1Q16656 503 aa17.29■□□□□ 0.36
SS18-209ENST00000578595 TMEM225Q6GV28 225 aa17.29■□□□□ 0.36
SS18-209ENST00000578595 WFDC8Q8IUA0 241 aa17.29■□□□□ 0.36
SS18-209ENST00000578595 MICU2Q8IYU8 434 aa17.29■□□□□ 0.36
SS18-209ENST00000578595 LSMEM1Q8N8F7 131 aa17.29■□□□□ 0.36
SS18-209ENST00000578595 OR6T1Q8NGN1 323 aa17.29■□□□□ 0.36
SS18-209ENST00000578595 NRGNQ92686 78 aa17.29■□□□□ 0.36
SS18-209ENST00000578595 SLC38A4Q969I6 547 aa17.29■□□□□ 0.36
SS18-209ENST00000578595 KTI12Q96EK9 354 aaPredicted RBP17.29■□□□□ 0.36
SS18-209ENST00000578595 ZNF583Q96ND8 569 aa17.29■□□□□ 0.36
SS18-209ENST00000578595 WFDC6Q9BQY6 131 aa17.29■□□□□ 0.36
SS18-209ENST00000578595 AP3M1Q9Y2T2 418 aa17.29■□□□□ 0.36
SS18-209ENST00000578595 ARL2BPQ9Y2Y0 163 aa17.29■□□□□ 0.36
SS18-209ENST00000578595 SH3GLB1Q9Y371 365 aa17.29■□□□□ 0.36
SS18-209ENST00000578595 IGKV3D-15A0A087WSY6 115 aa17.28■□□□□ 0.36
SS18-209ENST00000578595 ELOVL7A1L3X0 281 aa17.28■□□□□ 0.36
SS18-209ENST00000578595 C8BP07358 591 aa17.28■□□□□ 0.36
SS18-209ENST00000578595 CD247P20963 164 aa17.28■□□□□ 0.36
SS18-209ENST00000578595 LIPEQ05469 1076 aa17.28■□□□□ 0.36
SS18-209ENST00000578595 DAZAP2Q15038 168 aaPredicted RBP17.28■□□□□ 0.36
SS18-209ENST00000578595 PDK3Q15120 406 aa17.28■□□□□ 0.36
SS18-209ENST00000578595 FAM91A1Q658Y4 838 aa17.28■□□□□ 0.36
SS18-209ENST00000578595 DEF8Q6ZN54 512 aa17.28■□□□□ 0.36
SS18-209ENST00000578595 CDC20BQ86Y33 519 aa17.28■□□□□ 0.36
SS18-209ENST00000578595 KISS1RQ969F8 398 aaPredicted RBP17.28■□□□□ 0.36
SS18-209ENST00000578595 PIK3IP1Q96FE7 263 aa17.28■□□□□ 0.36
SS18-209ENST00000578595 TPD52L3Q96J77 140 aa17.28■□□□□ 0.36
SS18-209ENST00000578595 MYLK2Q9H1R3 596 aa17.28■□□□□ 0.36
SS18-209ENST00000578595 C12orf10Q9HB07 376 aa17.28■□□□□ 0.36
SS18-209ENST00000578595 CMTM6Q9NX76 183 aa17.28■□□□□ 0.36
SS18-209ENST00000578595 BAG5Q9UL15 447 aa17.28■□□□□ 0.36
SS18-209ENST00000578595 GPR52Q9Y2T5 361 aa17.28■□□□□ 0.36
SS18-209ENST00000578595 A0A0B4J2E0 115 aa17.27■□□□□ 0.36
SS18-209ENST00000578595 A0A1B0GX12 115 aa17.27■□□□□ 0.36
SS18-209ENST00000578595 AQP7P3A6NL99 342 aa17.27■□□□□ 0.36
SS18-209ENST00000578595 LYZL6O75951 148 aa17.27■□□□□ 0.36
SS18-209ENST00000578595 EDNRAP25101 427 aa17.27■□□□□ 0.36
SS18-209ENST00000578595 PCYT1AP49585 367 aa17.27■□□□□ 0.36
SS18-209ENST00000578595 H3F3AP84243 136 aa17.27■□□□□ 0.36
SS18-209ENST00000578595 FOXD4Q12950 439 aaPredicted RBP17.27■□□□□ 0.36
SS18-209ENST00000578595 VEZF1Q14119 521 aa17.27■□□□□ 0.36
SS18-209ENST00000578595 STK11Q15831 433 aa17.27■□□□□ 0.36
SS18-209ENST00000578595 ENTPD8Q5MY95 495 aa17.27■□□□□ 0.36
SS18-209ENST00000578595 C6orf89Q6UWU4 347 aa17.27■□□□□ 0.36
SS18-209ENST00000578595 Q6ZT83 130 aa17.27■□□□□ 0.36
SS18-209ENST00000578595 CCDC80Q76M96 950 aa17.27■□□□□ 0.36
SS18-209ENST00000578595 CARM1Q86X55 608 aa17.27■□□□□ 0.36
SS18-209ENST00000578595 RBM45Q8IUH3 476 aaKnown RBP17.27■□□□□ 0.36
SS18-209ENST00000578595 SLC15A3Q8IY34 581 aa17.27■□□□□ 0.36
SS18-209ENST00000578595 STEAP2Q8NFT2 490 aa17.27■□□□□ 0.36
SS18-209ENST00000578595 EPYCQ99645 322 aa17.27■□□□□ 0.36
SS18-209ENST00000578595 HOPXQ9BPY8 73 aaPredicted RBP17.27■□□□□ 0.36
SS18-209ENST00000578595 UPB1Q9UBR1 384 aa17.27■□□□□ 0.36
SS18-209ENST00000578595 ROS1P08922 2347 aa17.26■□□□□ 0.35
SS18-209ENST00000578595 TRAV36DV7A0A075B6V5 113 aa17.26■□□□□ 0.35
SS18-209ENST00000578595 OR2T1O43869 369 aa17.26■□□□□ 0.35
SS18-209ENST00000578595 SHOX2O60902 331 aaPredicted RBP17.26■□□□□ 0.35
SS18-209ENST00000578595 DCTN3O75935 186 aa17.26■□□□□ 0.35
SS18-209ENST00000578595 NQO1P15559 274 aaKnown RBP17.26■□□□□ 0.35
SS18-209ENST00000578595 PPP3CBP16298 524 aa17.26■□□□□ 0.35
SS18-209ENST00000578595 TNFRSF1BP20333 461 aa17.26■□□□□ 0.35
SS18-209ENST00000578595 PSMB1P20618 241 aaKnown RBP17.26■□□□□ 0.35
SS18-209ENST00000578595 SLC16A1P53985 500 aa17.26■□□□□ 0.35
SS18-209ENST00000578595 CDH12P55289 794 aa17.26■□□□□ 0.35
SS18-209ENST00000578595 SFRP5Q5T4F7 317 aa17.26■□□□□ 0.35
SS18-209ENST00000578595 FAM69AQ5T7M9 428 aa17.26■□□□□ 0.35
SS18-209ENST00000578595 C5orf46Q6UWT4 87 aa17.26■□□□□ 0.35
SS18-209ENST00000578595 BHLHA15Q7RTS1 189 aaPredicted RBP17.26■□□□□ 0.35
SS18-209ENST00000578595 GABRG1Q8N1C3 465 aa17.26■□□□□ 0.35
SS18-209ENST00000578595 OR9K2Q8NGE7 335 aa17.26■□□□□ 0.35
SS18-209ENST00000578595 MFSD8Q8NHS3 518 aa17.26■□□□□ 0.35
SS18-209ENST00000578595 S100PBPQ96BU1 408 aa17.26■□□□□ 0.35
SS18-209ENST00000578595 LRRC37BQ96QE4 947 aa17.26■□□□□ 0.35
SS18-209ENST00000578595 ALG2Q9H553 416 aa17.26■□□□□ 0.35
SS18-209ENST00000578595 PARPBPQ9NWS1 579 aa17.26■□□□□ 0.35
SS18-209ENST00000578595 GMPR2Q9P2T1 348 aaKnown RBP17.26■□□□□ 0.35
SS18-209ENST00000578595 FLVCR1Q9Y5Y0 555 aa17.26■□□□□ 0.35
SS18-209ENST00000578595 HEATR1Q9H583 2144 aaKnown RBP17.26■□□□□ 0.35
SS18-209ENST00000578595 A0A087WUJ7 227 aa17.25■□□□□ 0.35
SS18-209ENST00000578595 CIB4A0PJX0 185 aa17.25■□□□□ 0.35
SS18-209ENST00000578595 NME4O00746 187 aa17.25■□□□□ 0.35
SS18-209ENST00000578595 TPST2O60704 377 aa17.25■□□□□ 0.35
SS18-209ENST00000578595 FMO6PO60774 539 aa17.25■□□□□ 0.35
SS18-209ENST00000578595 NPIPB7O75200 414 aa17.25■□□□□ 0.35
SS18-209ENST00000578595 KRT33AO76009 404 aa17.25■□□□□ 0.35
SS18-209ENST00000578595 GOSR1O95249 250 aa17.25■□□□□ 0.35
SS18-209ENST00000578595 CRYGSP22914 178 aa17.25■□□□□ 0.35
SS18-209ENST00000578595 PRDX6P30041 224 aa17.25■□□□□ 0.35
SS18-209ENST00000578595 TAS2R41P59536 307 aa17.25■□□□□ 0.35
SS18-209ENST00000578595 PSME3P61289 254 aa17.25■□□□□ 0.35
SS18-209ENST00000578595 MXRA7P84157 204 aa17.25■□□□□ 0.35
SS18-209ENST00000578595 EGR4Q05215 589 aa17.25■□□□□ 0.35
SS18-209ENST00000578595 FAPQ12884 760 aa17.25■□□□□ 0.35
SS18-209ENST00000578595 ITGADQ13349 1161 aa17.25■□□□□ 0.35
SS18-209ENST00000578595 SLC17A1Q14916 467 aa17.25■□□□□ 0.35
SS18-209ENST00000578595 P2RY6Q15077 328 aa17.25■□□□□ 0.35
SS18-209ENST00000578595 NPTX1Q15818 432 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms