RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 LEG1Q6P5S2 330 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 PRSS58Q8IYP2 241 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 OR51Q1Q8NH59 317 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 SYNPRQ8TBG9 265 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 ELF4Q99607 663 aaPredicted RBP13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 LIN7BQ9HAP6 207 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 TCF7L1Q9HCS4 588 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 LOC100509620A0A075B734 347 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 TMEM72A0PK05 275 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 ARPC5O15511 151 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 KLF4O43474 513 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 PLPP2O43688 288 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 UBL3O95164 117 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 HNRNPA1P09651 372 aaKnown RBP eCLIP13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 PSMA6P60900 246 aaKnown RBP13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 SQSTM1Q13501 440 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 GSG1Q2KHT4 349 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 MS4A15Q8N5U1 240 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 ADAD1Q96M93 576 aaKnown RBP13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 PITHD1Q9GZP4 211 aaPredicted RBP13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 KCNK15Q9H427 330 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 UBQLN2Q9UHD9 624 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 COL4A3Q01955 1670 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 A0A0A6YYC8 382 aaPredicted RBP13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 A0A0G2JK05 382 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 I3L1I5 382 aaPredicted RBP13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 BTG1P62324 171 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 ZNF613Q6PF04 617 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 NHLRC1Q6VVB1 395 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 THEM6Q8WUY1 208 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 PGLYRP3Q96LB9 341 aa13.54□□□□□ -0.24
CUEDC1-206ENST00000577830 URADA6NGE7 173 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 HCRTR1O43613 425 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 NUDT14O95848 222 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 AGR2O95994 175 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 IFNA7P01567 189 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 KIAA1024LP59773 190 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 ZNHIT3Q15649 155 aaPredicted RBP13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 TCTE1Q5JU00 501 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 ABHD13Q7L211 337 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 PAQR7Q86WK9 346 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 OR2L13Q8N349 312 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 CDRT4Q8N9R6 151 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 BOLLQ8N9W6 283 aaKnown RBP13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 NR4A3Q92570 626 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 SCMH1Q96GD3 660 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 Q96M85 177 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 ANKRD19PQ9H560 264 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 ACTR10Q9NZ32 417 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 L7N2F9 121 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 MPC2O95563 127 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 TMIGD3P0DMS9 266 aaPredicted RBP13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 TAS2R43P59537 309 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 ZNF776Q68DI1 518 aaPredicted RBP13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 KIRREL2Q6UWL6 708 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 NLRC3Q7RTR2 1065 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 SIPA1Q96FS4 1042 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 OR2M2Q96R28 347 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 TIMM29Q9BSF4 260 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 MKKSQ9NPJ1 570 aaPredicted RBP13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 LRIT1Q9P2V4 623 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 CSTAP01040 98 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 SRMP19623 302 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 ZNF10P21506 573 aaPredicted RBP13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 C5AR1P21730 350 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 AQP2P41181 271 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 SFRP5Q5T4F7 317 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 GARNL3Q5VVW2 1013 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 CSNK1A1LQ8N752 337 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 GALNT11Q8NCW6 608 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 ADAMTS14Q8WXS8 1223 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 DVL3Q92997 716 aaPredicted RBP13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 SERINC2Q96SA4 455 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.53□□□□□ -0.244e-6■■■□□ 16.2
CUEDC1-206ENST00000577830 NOX3Q9HBY0 568 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 ZC4H2Q9NQZ6 224 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 DLL4Q9NR61 685 aa13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 ZNF223Q9UK11 482 aaPredicted RBP13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 TDRD6O60522 2096 aaKnown RBP13.53□□□□□ -0.24
CUEDC1-206ENST00000577830 C11orf98E9PRG8 122 aa13.52□□□□□ -0.24
CUEDC1-206ENST00000577830 KHNYNO15037 678 aaKnown RBP13.52□□□□□ -0.24
CUEDC1-206ENST00000577830 LIPCP11150 499 aa13.52□□□□□ -0.24
CUEDC1-206ENST00000577830 RPS15P62841 145 aaKnown RBP13.52□□□□□ -0.24
CUEDC1-206ENST00000577830 ZNF425Q6IV72 752 aa13.52□□□□□ -0.24
CUEDC1-206ENST00000577830 NUDT18Q6ZVK8 323 aa13.52□□□□□ -0.24
CUEDC1-206ENST00000577830 CAMKVQ8NCB2 501 aa13.52□□□□□ -0.24
CUEDC1-206ENST00000577830 ZNF350Q9GZX5 532 aa13.52□□□□□ -0.24
CUEDC1-206ENST00000577830 MCCC2Q9HCC0 563 aa13.52□□□□□ -0.24
CUEDC1-206ENST00000577830 B3GNT2Q9NY97 397 aa13.52□□□□□ -0.24
CUEDC1-206ENST00000577830 NCDNQ9UBB6 729 aa13.52□□□□□ -0.24
CUEDC1-206ENST00000577830 C19orf53Q9UNZ5 99 aaPredicted RBP13.52□□□□□ -0.24
CUEDC1-206ENST00000577830 LGALS8O00214 317 aa13.52□□□□□ -0.25
CUEDC1-206ENST00000577830 PLGP00747 810 aaPredicted RBP13.52□□□□□ -0.25
CUEDC1-206ENST00000577830 CDK5R1Q15078 307 aa13.52□□□□□ -0.25
CUEDC1-206ENST00000577830 TPRA1Q86W33 373 aa13.52□□□□□ -0.25
CUEDC1-206ENST00000577830 ZNF676Q8N7Q3 588 aa13.52□□□□□ -0.25
CUEDC1-206ENST00000577830 OR6N2Q8NGY6 317 aa13.52□□□□□ -0.25
CUEDC1-206ENST00000577830 ZDHHC1Q8WTX9 485 aa13.52□□□□□ -0.25
CUEDC1-206ENST00000577830 FCAMRQ8WWV6 532 aa13.52□□□□□ -0.25
CUEDC1-206ENST00000577830 LMF1Q96S06 567 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms