RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 SEMA4GQ9NTN9 838 aa12.69□□□□□ -0.38
RNF43-202ENST00000577625 KCNE5Q9UJ90 142 aa12.69□□□□□ -0.38
RNF43-202ENST00000577625 SSR3Q9UNL2 185 aa12.69□□□□□ -0.38
RNF43-202ENST00000577625 ERVK-19Q9WJR5 959 aa12.69□□□□□ -0.38
RNF43-202ENST00000577625 A0A087WUU8 490 aa12.68□□□□□ -0.38
RNF43-202ENST00000577625 NPIPA5A0A0B4J1W7 369 aa12.68□□□□□ -0.38
RNF43-202ENST00000577625 A0A1B0GX78 115 aa12.68□□□□□ -0.38
RNF43-202ENST00000577625 NPIPA7E9PJI5 369 aa12.68□□□□□ -0.38
RNF43-202ENST00000577625 F8W036 122 aa12.68□□□□□ -0.38
RNF43-202ENST00000577625 MPZL2O60487 215 aa12.68□□□□□ -0.38
RNF43-202ENST00000577625 PRAMEF2O60811 474 aa12.68□□□□□ -0.38
RNF43-202ENST00000577625 CER1O95813 267 aa12.68□□□□□ -0.38
RNF43-202ENST00000577625 NPIPA8P0DM63 369 aa12.68□□□□□ -0.38
RNF43-202ENST00000577625 ANXA3P12429 323 aa12.68□□□□□ -0.38
RNF43-202ENST00000577625 SLC23A3Q6PIS1 610 aa12.68□□□□□ -0.38
RNF43-202ENST00000577625 ZAR1Q86SH2 424 aa12.68□□□□□ -0.38
RNF43-202ENST00000577625 CLRN3Q8NCR9 226 aa12.68□□□□□ -0.38
RNF43-202ENST00000577625 NAT6Q93015 286 aa12.68□□□□□ -0.38
RNF43-202ENST00000577625 PTCHD1Q96NR3 888 aa12.68□□□□□ -0.38
RNF43-202ENST00000577625 MED9Q9NWA0 146 aa12.68□□□□□ -0.38
RNF43-202ENST00000577625 PLEKHB1Q9UF11 243 aaPredicted RBP12.68□□□□□ -0.38
RNF43-202ENST00000577625 MMACHCQ9Y4U1 282 aa12.68□□□□□ -0.38
RNF43-202ENST00000577625 IGKV3D-11A0A0A0MRZ8 115 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 SH3D21A4FU49 640 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 PEX12O00623 359 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 ABCD4O14678 606 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 CDRT1O95170 752 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 FBLP22087 321 aaKnown RBP12.67□□□□□ -0.38
RNF43-202ENST00000577625 PTBP1P26599 531 aaKnown RBP eCLIP12.67□□□□□ -0.384e-7■■■■□ 21.5
RNF43-202ENST00000577625 STOMP27105 288 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 POU1F1P28069 291 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 ZNF81P51508 661 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 PGDP52209 483 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 ZNF136P52737 540 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 EFNA3P52797 238 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 PUDPQ08623 228 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 HNRNPA0Q13151 305 aaKnown RBP12.67□□□□□ -0.38
RNF43-202ENST00000577625 YOD1Q5VVQ6 348 aaPredicted RBP12.67□□□□□ -0.38
RNF43-202ENST00000577625 PLAG1Q6DJT9 500 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 ZC3H14Q6PJT7 736 aaKnown RBP12.67□□□□□ -0.38
RNF43-202ENST00000577625 METAP1DQ6UB28 335 aaPredicted RBP12.67□□□□□ -0.38
RNF43-202ENST00000577625 NPSR1Q6W5P4 371 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 MS4A15Q8N5U1 240 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 OR11H4Q8NGC9 324 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 OR4D9Q8NGE8 314 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 OR5T2Q8NGG2 359 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 AP3S1Q92572 193 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 TSLPQ969D9 159 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 YIPF5Q969M3 257 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 KCNJ15Q99712 375 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 NPAS1Q99742 590 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 LRRN3Q9H3W5 708 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 SLC6A14Q9UN76 642 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 A0A0A6YYJ9 748 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 IGHV5-10-1A0A0J9YXX1 117 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 CDHR4A6H8M9 788 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 SOX14O95416 240 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 TGM6O95932 706 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 CLPSP04118 112 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 S100A6P06703 90 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 GSTM3P21266 225 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 APEX1P27695 318 aaKnown RBP12.67□□□□□ -0.38
RNF43-202ENST00000577625 IFNGR2P38484 337 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 LSM11P83369 360 aaKnown RBP eCLIP12.67□□□□□ -0.389e-6■□□□□ 8.7
RNF43-202ENST00000577625 LPAL2Q16609 132 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 LGALSLQ3ZCW2 172 aaPredicted RBP12.67□□□□□ -0.38
RNF43-202ENST00000577625 FAM209BQ5JX69 171 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 MRPL2Q5T653 305 aaKnown RBP12.67□□□□□ -0.38
RNF43-202ENST00000577625 C1orf189Q5VU69 101 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 QSOX2Q6ZRP7 698 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 RANBP3LQ86VV4 465 aaPredicted RBP12.67□□□□□ -0.38
RNF43-202ENST00000577625 ZNF615Q8N8J6 731 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 RCBTB1Q8NDN9 531 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 C16orf52Q8NHV5 167 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 SLC22A8Q8TCC7 542 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 HGDQ93099 445 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 TMEM43Q9BTV4 400 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 POLR2J2Q9GZM3 115 aaKnown RBP12.67□□□□□ -0.38
RNF43-202ENST00000577625 PPP1R3EQ9H7J1 279 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 ZNF222Q9UK12 451 aa12.67□□□□□ -0.38
RNF43-202ENST00000577625 RALGAPA1Q6GYQ0 2036 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 SLC22A23A1A5C7 686 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 H3BN98 237 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 IGKV1D-16P01601 117 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 APOC1P02654 83 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 SDC2P34741 201 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 INPP1P49441 399 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 PPP3R1P63098 170 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 MXD1Q05195 221 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 ARHGAP40Q5TG30 622 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 C12orf73Q69YU5 71 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 ZNF704Q6ZNC4 412 aaPredicted RBP12.66□□□□□ -0.38
RNF43-202ENST00000577625 OR4N2Q8NGD1 307 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 PTPMT1Q8WUK0 201 aaPredicted RBP12.66□□□□□ -0.38
RNF43-202ENST00000577625 ACOT11Q8WXI4 607 aaPredicted RBP12.66□□□□□ -0.38
RNF43-202ENST00000577625 NXPE2Q96DL1 559 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 SLC41A3Q96GZ6 507 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 GPA33Q99795 319 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 SOSTQ9BQB4 213 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 OR10A5Q9H207 317 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms