RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 Q96MF0 132 aa11.16□□□□□ -0.62
SSH2-205ENST00000577483 ZNF385AQ96PM9 386 aaKnown RBP11.16□□□□□ -0.62
SSH2-205ENST00000577483 USB1Q9BQ65 265 aaKnown RBP11.16□□□□□ -0.62
SSH2-205ENST00000577483 WFDC6Q9BQY6 131 aa11.16□□□□□ -0.62
SSH2-205ENST00000577483 PTDSS2Q9BVG9 487 aa11.16□□□□□ -0.62
SSH2-205ENST00000577483 ARMC7Q9H6L4 198 aa11.16□□□□□ -0.62
SSH2-205ENST00000577483 CACYBPQ9HB71 228 aaKnown RBP11.16□□□□□ -0.62
SSH2-205ENST00000577483 NGBQ9NPG2 151 aa11.16□□□□□ -0.62
SSH2-205ENST00000577483 SLC7A10Q9NS82 523 aa11.16□□□□□ -0.62
SSH2-205ENST00000577483 TAS2R16Q9NYV7 291 aa11.16□□□□□ -0.62
SSH2-205ENST00000577483 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.16□□□□□ -0.62
SSH2-205ENST00000577483 ZANQ9Y493 2812 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 FTCDNL1E5RQL4 147 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 SOD3P08294 240 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 PAX1P15863 534 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 AQP1P29972 269 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 SCARB2Q14108 478 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 GABRA6Q16445 453 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 ZNF672Q499Z4 452 aaPredicted RBP11.15□□□□□ -0.62
SSH2-205ENST00000577483 RUNDC3AQ59EK9 446 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 C9orf135Q5VTT2 229 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 C6orf89Q6UWU4 347 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 YTHDF3Q7Z739 585 aaKnown RBP11.15□□□□□ -0.62
SSH2-205ENST00000577483 DHDDSQ86SQ9 333 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 GPAT4Q86UL3 456 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 PTOV1Q86YD1 416 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 OR52N5Q8NH56 324 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 TMEM171Q8WVE6 324 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 SLC35B4Q969S0 331 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 FBXW5Q969U6 566 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 TMEM45BQ96B21 275 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 C18orf12Q96KH6 178 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 PRR14Q9BWN1 585 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 TRIM2Q9C040 744 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 AMBRA1Q9C0C7 1298 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 RABEP2Q9H5N1 569 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 TMEM38AQ9H6F2 299 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 SEC14L4Q9UDX3 406 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 LEF1Q9UJU2 399 aaPredicted RBP11.15□□□□□ -0.62
SSH2-205ENST00000577483 PRDM4Q9UKN5 801 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 LAMP3Q9UQV4 416 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 SLC25A15Q9Y619 301 aa11.15□□□□□ -0.62
SSH2-205ENST00000577483 CHD3Q12873 2000 aaKnown RBP11.15□□□□□ -0.63
SSH2-205ENST00000577483 NIPBLQ6KC79 2804 aaeCLIP11.14□□□□□ -0.63
SSH2-205ENST00000577483 A0A0G2JND7 137 aa11.14□□□□□ -0.63
SSH2-205ENST00000577483 CIB4A0PJX0 185 aa11.14□□□□□ -0.63
SSH2-205ENST00000577483 CCT8L1PA6NM43 557 aa11.14□□□□□ -0.63
SSH2-205ENST00000577483 SHISA9B4DS77 424 aa11.14□□□□□ -0.63
SSH2-205ENST00000577483 ABCD4O14678 606 aa11.14□□□□□ -0.63
SSH2-205ENST00000577483 ARHGEF9O43307 516 aa11.14□□□□□ -0.63
SSH2-205ENST00000577483 DANCRP0C864 163 aa11.14□□□□□ -0.63
SSH2-205ENST00000577483 RPS5P46782 204 aaKnown RBP11.14□□□□□ -0.63
SSH2-205ENST00000577483 MTPNP58546 118 aa11.14□□□□□ -0.63
SSH2-205ENST00000577483 SLC25A3Q00325 362 aa11.14□□□□□ -0.63
SSH2-205ENST00000577483 SPOCK1Q08629 439 aa11.14□□□□□ -0.63
SSH2-205ENST00000577483 DHRS4L2Q6PKH6 230 aa11.14□□□□□ -0.63
SSH2-205ENST00000577483 PRSS57Q6UWY2 283 aa11.14□□□□□ -0.63
SSH2-205ENST00000577483 P2RY8Q86VZ1 359 aa11.14□□□□□ -0.63
SSH2-205ENST00000577483 DPP10Q8N608 796 aa11.14□□□□□ -0.63
SSH2-205ENST00000577483 LSMEM1Q8N8F7 131 aa11.14□□□□□ -0.63
SSH2-205ENST00000577483 STK35Q8TDR2 534 aa11.14□□□□□ -0.63
SSH2-205ENST00000577483 MUCL1Q96DR8 90 aa11.14□□□□□ -0.63
SSH2-205ENST00000577483 KTI12Q96EK9 354 aaPredicted RBP11.14□□□□□ -0.63
SSH2-205ENST00000577483 SF3B5Q9BWJ5 86 aaKnown RBP11.14□□□□□ -0.63
SSH2-205ENST00000577483 TAPBPLQ9BX59 468 aa11.14□□□□□ -0.63
SSH2-205ENST00000577483 ZNF701Q9NV72 531 aaPredicted RBP11.14□□□□□ -0.63
SSH2-205ENST00000577483 ZNF446Q9NWS9 450 aa11.14□□□□□ -0.63
SSH2-205ENST00000577483 CORO2BQ9UQ03 480 aa11.14□□□□□ -0.63
SSH2-205ENST00000577483 MAGED1Q9Y5V3 778 aaPredicted RBP11.14□□□□□ -0.63
SSH2-205ENST00000577483 NSD1Q96L73 2696 aaPredicted RBP11.14□□□□□ -0.63
SSH2-205ENST00000577483 A0A1B0GWA3 101 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 TRIM64A6NGJ6 449 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 TRIM64BA6NI03 449 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 EVPLLA8MZ36 301 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 TPST2O60704 377 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 INHBBP09529 407 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 PNMTP11086 282 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 SLC6A2P23975 617 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 LGALS3BPQ08380 585 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 DMTNQ08495 405 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 PGGHGQ32M88 737 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 CGB2Q6NT52 195 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 Q71RC1 249 aaPredicted RBP11.13□□□□□ -0.63
SSH2-205ENST00000577483 KRT73Q86Y46 540 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 KDM8Q8N371 416 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 WDR31Q8NA23 367 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 ANKRD27Q96NW4 1050 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 MUS81Q96NY9 551 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 CGREF1Q99674 301 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 SIKE1Q9BRV8 207 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 SLCO5A1Q9H2Y9 848 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 CXorf56Q9H5V9 222 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 PARPBPQ9NWS1 579 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 UPB1Q9UBR1 384 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 NDUFAF1Q9Y375 327 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 YLPM1P49750 1951 aaKnown RBP11.13□□□□□ -0.63
SSH2-205ENST00000577483 IGKV1D-42A0A075B6H8 117 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 ELOA3DA6NLF2 546 aaPredicted RBP11.13□□□□□ -0.63
SSH2-205ENST00000577483 H7C1Q1 480 aa11.13□□□□□ -0.63
SSH2-205ENST00000577483 OVOL3O00110 214 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms