RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 TOXO94900 526 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 GADD45GO95257 159 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 BGLAPP02818 100 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 GLI4P10075 376 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 ENPP1P22413 925 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 AGFG1P52594 562 aaKnown RBP7.66□□□□□ -1.18
NUP88-211ENST00000575976 NUP107P57740 925 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 ACTR3P61158 418 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 CSNK2A1P68400 391 aaPredicted RBP7.66□□□□□ -1.18
NUP88-211ENST00000575976 SLC35A1P78382 337 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 PMPCAQ10713 525 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 PPP1R8Q12972 351 aaKnown RBP7.66□□□□□ -1.18
NUP88-211ENST00000575976 DGCR6Q14129 220 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 ZNF239Q16600 458 aaKnown RBP7.66□□□□□ -1.18
NUP88-211ENST00000575976 FGD3Q5JSP0 725 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 FAM69AQ5T7M9 428 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 OR2T5Q6IEZ7 315 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 PODNL1Q6PEZ8 512 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 TBPL2Q6SJ96 375 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 C5orf46Q6UWT4 87 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 P4HA3Q7Z4N8 544 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 C9orf106Q8NAJ2 232 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 OR2T29Q8NH02 315 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 OR6S1Q8NH40 331 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 MBD3L2Q8NHZ7 208 aaPredicted RBP7.66□□□□□ -1.18
NUP88-211ENST00000575976 FNDC9Q8TBE3 224 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 SLC7A13Q8TCU3 470 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 ACOT11Q8WXI4 607 aaPredicted RBP7.66□□□□□ -1.18
NUP88-211ENST00000575976 WNT2BQ93097 391 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 SLC25A36Q96CQ1 311 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 DUS3LQ96G46 650 aaKnown RBP7.66□□□□□ -1.18
NUP88-211ENST00000575976 EPYCQ99645 322 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 FUZQ9BT04 418 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 TAPBPLQ9BX59 468 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 PRRG4Q9BZD6 226 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 SLC19A3Q9BZV2 496 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 ANKRD19PQ9H560 264 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 TIGARQ9NQ88 270 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 C20orf141Q9NUB4 165 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 VNN3Q9NY84 501 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 MCTS1Q9ULC4 181 aaKnown RBP7.66□□□□□ -1.18
NUP88-211ENST00000575976 MED31Q9Y3C7 131 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 ZNF175Q9Y473 711 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 GTF3C1Q12789 2109 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 SVILO95425 2214 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 CLEC18AA5D8T8 446 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 ZNF814B7Z6K7 855 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 TNFRSF11BO00300 401 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 DNPH1O43598 174 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 RAMP1O60894 148 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 FZD7O75084 574 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 TIPRLO75663 272 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 AKR7A3O95154 331 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 CH25HO95992 272 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 CST1P01037 141 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 IFI30P13284 250 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 HOXB6P17509 224 aaKnown RBP7.65□□□□□ -1.18
NUP88-211ENST00000575976 GRPRP30550 384 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 TIMP3P35625 211 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 LIMS1P48059 325 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 HMGA2P52926 109 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 SMIM11AP58511 58 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 H3F3AP84243 136 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 PRKCDQ05655 676 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 SEC23BQ15437 767 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 ZNF74Q16587 644 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 EXOC3L2Q2M3D2 409 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 OTUD3Q5T2D3 398 aaPredicted RBP7.65□□□□□ -1.18
NUP88-211ENST00000575976 RIPPLY2Q5TAB7 128 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 TMEM211Q6ICI0 200 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 CLEC18BQ6UXF7 455 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 ZNF730Q6ZMV8 503 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 MBOAT2Q6ZWT7 520 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 FCRLAQ7L513 359 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 RRM2BQ7LG56 351 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 SLC46A3Q7Z3Q1 461 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 MEX3DQ86XN8 651 aaKnown RBP7.65□□□□□ -1.18
NUP88-211ENST00000575976 CCDC103Q8IW40 242 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 NRMQ8IXM6 262 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 RNF113BQ8IZP6 322 aaKnown RBP7.65□□□□□ -1.18
NUP88-211ENST00000575976 C10orf53Q8N6V4 93 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 LRRC17Q8N6Y2 441 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 TMEM99Q8N816 258 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 CLEC18CQ8NCF0 446 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 OR4C15Q8NGM1 316 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 ABHD3Q8WU67 409 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 PYDC1Q8WXC3 89 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 ZHX1-C8orf76Q96EF9 292 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 SGTBQ96EQ0 304 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 MOGAT1Q96PD6 335 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 ALPK1Q96QP1 1244 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 NAA11Q9BSU3 229 aaPredicted RBP7.65□□□□□ -1.18
NUP88-211ENST00000575976 YY1AP1Q9H869 796 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 REEP1Q9H902 201 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 RNF122Q9H9V4 155 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 ARMC1Q9NVT9 282 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 KLHL13Q9P2N7 655 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 SEC14L4Q9UDX3 406 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 CLEC4AQ9UMR7 237 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 AP4S1Q9Y587 144 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms