RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 PLSCR4Q9NRQ2 329 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 ELOVL5Q9NYP7 299 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 NAV2Q8IVL1 2488 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 NOTCH2Q04721 2471 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 FBN2P35556 2912 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 SH3D21A4FU49 640 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 CYTIPO60759 359 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 MFN2O95140 757 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 YES1P07947 543 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 CCKARP32238 428 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 UGT2B10P36537 528 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 CLK1P49759 484 aaKnown RBP11.79□□□□□ -0.52
RPAIN-216ENST00000575599 PCBP3P57721 371 aaKnown RBP11.79□□□□□ -0.52
RPAIN-216ENST00000575599 RGS8P57771 180 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-216ENST00000575599 KPNB1Q14974 876 aaKnown RBP11.79□□□□□ -0.52
RPAIN-216ENST00000575599 LRRC23Q53EV4 343 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-216ENST00000575599 MTX3Q5HYI7 312 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 FBXW10Q5XX13 1052 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 PATL1Q86TB9 770 aaKnown RBP11.79□□□□□ -0.52
RPAIN-216ENST00000575599 POP5Q969H6 163 aaKnown RBP11.79□□□□□ -0.52
RPAIN-216ENST00000575599 SLC35B4Q969S0 331 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 C3orf49Q96BT1 292 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 ADPRHL2Q9NX46 363 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 KLHL28Q9NXS3 571 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 RPS6KB2Q9UBS0 482 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 RPS6KA6Q9UK32 745 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 A6NNC1 897 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 M0QX08 132 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 EPXP11678 715 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 IMPDH2P12268 514 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 HTR2AP28223 471 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 IDUAP35475 653 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 MAP2K6P52564 334 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 ACTR3P61158 418 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 ABLIM2Q6H8Q1 611 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 LCN8Q6JVE9 175 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 OR52E4Q8NGH9 312 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 TACO1Q9BSH4 297 aaKnown RBP11.79□□□□□ -0.52
RPAIN-216ENST00000575599 PRR14Q9BWN1 585 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 DENND2DQ9H6A0 471 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-216ENST00000575599 GORASP2Q9H8Y8 452 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 BCO1Q9HAY6 547 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 GP6Q9HCN6 339 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 NDRG3Q9UGV2 375 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 ING1Q9UK53 422 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-216ENST00000575599 TRAPPC4Q9Y296 219 aa11.79□□□□□ -0.52
RPAIN-216ENST00000575599 CSMD2Q7Z408 3487 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 MAST4O15021 2626 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 CSMD1Q96PZ7 3565 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 ELOA3DA6NLF2 546 aaPredicted RBP11.78□□□□□ -0.52
RPAIN-216ENST00000575599 AQP12BA6NM10 295 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 A8MVM7 634 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 ZNF814B7Z6K7 855 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 C16orf97H3BN30 126 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 M0R3H8 397 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 ACOT8O14734 319 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 DNPH1O43598 174 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 GCM2O75603 506 aaPredicted RBP11.78□□□□□ -0.52
RPAIN-216ENST00000575599 CTAG2O75638 210 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 ZNF682O95780 498 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 SERPINA1P01009 418 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 FPR1P21462 350 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 KDELR2P33947 212 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 ERFP50548 548 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 SLC35A1P78382 337 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 ELF3P78545 371 aaPredicted RBP11.78□□□□□ -0.52
RPAIN-216ENST00000575599 POU4F3Q15319 338 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 OR7A5Q15622 319 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 ELOA3BQ3SY89 546 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 ANKRD34AQ69YU3 496 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 TFAP2EQ6VUC0 442 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 BEND4Q6ZU67 534 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.78□□□□□ -0.52
RPAIN-216ENST00000575599 ATG4DQ86TL0 474 aaPredicted RBP11.78□□□□□ -0.52
RPAIN-216ENST00000575599 CCDC103Q8IW40 242 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 AQP12AQ8IXF9 295 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 ELOA3Q8NG57 546 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 PIGXQ8TBF5 258 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 RNF217Q8TC41 542 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 LZICQ8WZA0 190 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 TAMM41Q96BW9 452 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 ZC3HAV1LQ96H79 300 aaKnown RBP11.78□□□□□ -0.52
RPAIN-216ENST00000575599 DACH2Q96NX9 599 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 WFDC6Q9BQY6 131 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 MED18Q9BUE0 208 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 POLDIP3Q9BY77 421 aaKnown RBP11.78□□□□□ -0.52
RPAIN-216ENST00000575599 CLEC4MQ9H2X3 399 aaPredicted RBP11.78□□□□□ -0.52
RPAIN-216ENST00000575599 FANCFQ9NPI8 374 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 EMC3Q9P0I2 261 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 TESQ9UGI8 421 aaKnown RBP11.78□□□□□ -0.52
RPAIN-216ENST00000575599 SAMD4AQ9UPU9 718 aaKnown RBP11.78□□□□□ -0.52
RPAIN-216ENST00000575599 TESMINQ9Y4I5 508 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 ANKHD1Q8IWZ3 2542 aaKnown RBP11.78□□□□□ -0.52
RPAIN-216ENST00000575599 ITPR2Q14571 2701 aa11.78□□□□□ -0.52
RPAIN-216ENST00000575599 ABCA12Q86UK0 2595 aa11.77□□□□□ -0.53
RPAIN-216ENST00000575599 A0A1B0GWA3 101 aa11.77□□□□□ -0.53
RPAIN-216ENST00000575599 ZNF724A8MTY0 619 aa11.77□□□□□ -0.53
RPAIN-216ENST00000575599 TMEM229AB2RXF0 380 aa11.77□□□□□ -0.53
RPAIN-216ENST00000575599 CASKO14936 926 aa11.77□□□□□ -0.53
RPAIN-216ENST00000575599 RAMP1O60894 148 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms