RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 SPOCK3Q9BQ16 436 aa13.55□□□□□ -0.24
LITAF-217ENST00000575426 ENKD1Q9H0I2 346 aa13.55□□□□□ -0.24
LITAF-217ENST00000575426 PCDHAC1Q9H158 963 aa13.55□□□□□ -0.24
LITAF-217ENST00000575426 OPN3Q9H1Y3 402 aaPredicted RBP13.55□□□□□ -0.24
LITAF-217ENST00000575426 NPDC1Q9NQX5 325 aaPredicted RBP13.55□□□□□ -0.24
LITAF-217ENST00000575426 CD300AQ9UGN4 299 aa13.55□□□□□ -0.24
LITAF-217ENST00000575426 SAMD4AQ9UPU9 718 aaKnown RBP13.55□□□□□ -0.24
LITAF-217ENST00000575426 PKDREJQ9NTG1 2253 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 ZNF724A8MTY0 619 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 AKR7A3O95154 331 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 CGAP01215 116 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 IFNW1P05000 195 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 T-ENOLP0DO92 83 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 H3F3AP84243 136 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 EGR4Q05215 589 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 MFSD13AQ14CX5 517 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 FAM69AQ5T7M9 428 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 ZNF787Q6DD87 383 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 ABLIM2Q6H8Q1 611 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 BEND4Q6ZU67 534 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 VTCN1Q7Z7D3 282 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 GALNT5Q7Z7M9 940 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 DMRTC2Q8IXT2 367 aaPredicted RBP13.54□□□□□ -0.24
LITAF-217ENST00000575426 C10orf53Q8N6V4 93 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 TMEM99Q8N816 258 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 ZNF775Q96BV0 537 aaPredicted RBP13.54□□□□□ -0.24
LITAF-217ENST00000575426 SLC41A3Q96GZ6 507 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 ZNF300Q96RE9 604 aaPredicted RBP13.54□□□□□ -0.24
LITAF-217ENST00000575426 TMEM43Q9BTV4 400 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 C1orf21Q9H246 121 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 GORASP2Q9H8Y8 452 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 BCO1Q9HAY6 547 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 GALNT8Q9NY28 637 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 ELOVL5Q9NYP7 299 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 RIMS3Q9UJD0 308 aa13.54□□□□□ -0.24
LITAF-217ENST00000575426 NOSIPQ9Y314 301 aaKnown RBP13.54□□□□□ -0.24
LITAF-217ENST00000575426 ASH1LQ9NR48 2969 aaKnown RBP13.54□□□□□ -0.24
LITAF-217ENST00000575426 UBOX5O94941 541 aa13.53□□□□□ -0.24
LITAF-217ENST00000575426 VAMP5O95183 116 aa13.53□□□□□ -0.24
LITAF-217ENST00000575426 OR5F1O95221 314 aa13.53□□□□□ -0.24
LITAF-217ENST00000575426 POU2F1P14859 743 aa13.53□□□□□ -0.24
LITAF-217ENST00000575426 KLK2P20151 261 aa13.53□□□□□ -0.24
LITAF-217ENST00000575426 MSX2P35548 267 aaPredicted RBP13.53□□□□□ -0.24
LITAF-217ENST00000575426 EXOC3L2Q2M3D2 409 aa13.53□□□□□ -0.24
LITAF-217ENST00000575426 LINC00114Q6XXX2 140 aa13.53□□□□□ -0.24
LITAF-217ENST00000575426 NUFIP2Q7Z417 695 aaKnown RBP13.53□□□□□ -0.24
LITAF-217ENST00000575426 GDF7Q7Z4P5 450 aa13.53□□□□□ -0.24
LITAF-217ENST00000575426 CYP4Z1Q86W10 505 aa13.53□□□□□ -0.24
LITAF-217ENST00000575426 P3H2Q8IVL5 708 aa13.53□□□□□ -0.24
LITAF-217ENST00000575426 ZNF100Q8IYN0 542 aa13.53□□□□□ -0.24
LITAF-217ENST00000575426 OR6S1Q8NH40 331 aa13.53□□□□□ -0.24
LITAF-217ENST00000575426 TAAR8Q969N4 342 aa13.53□□□□□ -0.24
LITAF-217ENST00000575426 MARVELD3Q96A59 401 aa13.53□□□□□ -0.24
LITAF-217ENST00000575426 HSH2DQ96JZ2 352 aa13.53□□□□□ -0.24
LITAF-217ENST00000575426 NSMCE2Q96MF7 247 aa13.53□□□□□ -0.24
LITAF-217ENST00000575426 ASPNQ9BXN1 380 aa13.53□□□□□ -0.24
LITAF-217ENST00000575426 DCAF13Q9NV06 445 aaKnown RBP13.53□□□□□ -0.24
LITAF-217ENST00000575426 PARPBPQ9NWS1 579 aa13.53□□□□□ -0.24
LITAF-217ENST00000575426 PRPF19Q9UMS4 504 aaKnown RBP13.53□□□□□ -0.24
LITAF-217ENST00000575426 SNX13Q9Y5W8 968 aa13.53□□□□□ -0.24
LITAF-217ENST00000575426 CACNA1DQ01668 2161 aa13.52□□□□□ -0.24
LITAF-217ENST00000575426 IGKV3D-15A0A087WSY6 115 aa13.52□□□□□ -0.25
LITAF-217ENST00000575426 AQP7P3A6NL99 342 aa13.52□□□□□ -0.25
LITAF-217ENST00000575426 ZNF716A6NP11 495 aa13.52□□□□□ -0.25
LITAF-217ENST00000575426 MRPL33O75394 65 aaKnown RBP13.52□□□□□ -0.25
LITAF-217ENST00000575426 STAMBPO95630 424 aa13.52□□□□□ -0.25
LITAF-217ENST00000575426 THRBP10828 461 aa13.52□□□□□ -0.25
LITAF-217ENST00000575426 CBLP22681 906 aa13.52□□□□□ -0.25
LITAF-217ENST00000575426 CD79BP40259 229 aa13.52□□□□□ -0.25
LITAF-217ENST00000575426 KIR2DL3P43628 341 aa13.52□□□□□ -0.25
LITAF-217ENST00000575426 SORDQ00796 357 aa13.52□□□□□ -0.25
LITAF-217ENST00000575426 IL1RL1Q01638 556 aa13.52□□□□□ -0.25
LITAF-217ENST00000575426 ST3GAL3Q11203 375 aa13.52□□□□□ -0.25
LITAF-217ENST00000575426 FOXD4Q12950 439 aaPredicted RBP13.52□□□□□ -0.25
LITAF-217ENST00000575426 PIN1Q13526 163 aaPredicted RBP13.52□□□□□ -0.25
LITAF-217ENST00000575426 ZNF474Q6S9Z5 364 aaPredicted RBP13.52□□□□□ -0.25
LITAF-217ENST00000575426 GPAT4Q86UL3 456 aa13.52□□□□□ -0.25
LITAF-217ENST00000575426 HS6ST2Q96MM7 605 aa13.52□□□□□ -0.25
LITAF-217ENST00000575426 PTDSS2Q9BVG9 487 aa13.52□□□□□ -0.25
LITAF-217ENST00000575426 FNDC11Q9BVV2 318 aa13.52□□□□□ -0.25
LITAF-217ENST00000575426 SF3B5Q9BWJ5 86 aaKnown RBP13.52□□□□□ -0.25
LITAF-217ENST00000575426 AMBRA1Q9C0C7 1298 aa13.52□□□□□ -0.25
LITAF-217ENST00000575426 TAS2R1Q9NYW7 299 aa13.52□□□□□ -0.25
LITAF-217ENST00000575426 NDRG3Q9UGV2 375 aa13.52□□□□□ -0.25
LITAF-217ENST00000575426 RASD1Q9Y272 281 aa13.52□□□□□ -0.25
LITAF-217ENST00000575426 FAM32AQ9Y421 112 aaKnown RBP13.52□□□□□ -0.25
LITAF-217ENST00000575426 FLNBO75369 2602 aaKnown RBP13.52□□□□□ -0.25
LITAF-217ENST00000575426 IGKV1D-42A0A075B6H8 117 aa13.51□□□□□ -0.25
LITAF-217ENST00000575426 TUBAL3A6NHL2 446 aa13.51□□□□□ -0.25
LITAF-217ENST00000575426 ZNF814B7Z6K7 855 aa13.51□□□□□ -0.25
LITAF-217ENST00000575426 ARPC2O15144 300 aa13.51□□□□□ -0.25
LITAF-217ENST00000575426 GYG2O15488 501 aa13.51□□□□□ -0.25
LITAF-217ENST00000575426 RAMP1O60894 148 aa13.51□□□□□ -0.25
LITAF-217ENST00000575426 HIST1H2ABP04908 130 aa13.51□□□□□ -0.25
LITAF-217ENST00000575426 NQO1P15559 274 aaKnown RBP13.51□□□□□ -0.25
LITAF-217ENST00000575426 IGFBP2P18065 325 aa13.51□□□□□ -0.25
LITAF-217ENST00000575426 PTNP21246 168 aa13.51□□□□□ -0.25
LITAF-217ENST00000575426 YAP1P46937 504 aaKnown RBP13.51□□□□□ -0.25
LITAF-217ENST00000575426 PCYT1AP49585 367 aa13.51□□□□□ -0.25
LITAF-217ENST00000575426 SLC16A1P53985 500 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms