RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 EML6Q6ZMW3 1958 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 TRAV17A0A0B4J275 112 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 H3BML4 177 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 BLOC1S5-TXNDC5H3BN57 136 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 BHLHE40O14503 412 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 GLSO94925 669 aaPredicted RBP12.34□□□□□ -0.43
CCDC40-209ENST00000573474 LYNP07948 512 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 TSPAN19P0C672 248 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 GRK5P34947 590 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 PCYT1AP49585 367 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 B3GALT5-AS1P59052 145 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 SNRPGP62308 76 aaKnown RBP12.34□□□□□ -0.43
CCDC40-209ENST00000573474 TEKQ02763 1124 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 TOP3AQ13472 1001 aaPredicted RBP12.34□□□□□ -0.43
CCDC40-209ENST00000573474 SNAPC1Q16533 368 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 HYAL4Q2M3T9 481 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 RBM48Q5RL73 367 aaKnown RBP12.34□□□□□ -0.43
CCDC40-209ENST00000573474 IGFL3Q6UXB1 125 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 THSD4Q6ZMP0 1018 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 DPY19L2P2Q6ZN68 376 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 NANOGNBQ7Z5D8 188 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 YRDCQ86U90 279 aaKnown RBP12.34□□□□□ -0.43
CCDC40-209ENST00000573474 LNX2Q8N448 690 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 ZADH2Q8N4Q0 377 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 ZFP62Q8NB50 900 aaPredicted RBP12.34□□□□□ -0.43
CCDC40-209ENST00000573474 FAM83FQ8NEG4 500 aaPredicted RBP12.34□□□□□ -0.43
CCDC40-209ENST00000573474 OR8J1Q8NGP2 316 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 OR4Q3Q8NH05 313 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 OR5J2Q8NH18 312 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 ARL5BQ96KC2 179 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 UBL7Q96S82 380 aaPredicted RBP12.34□□□□□ -0.43
CCDC40-209ENST00000573474 TAPBPLQ9BX59 468 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 ASPNQ9BXN1 380 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 POLDIP3Q9BY77 421 aaKnown RBP12.34□□□□□ -0.43
CCDC40-209ENST00000573474 TTTY12Q9BZ98 90 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 ENKD1Q9H0I2 346 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 ADNPQ9H2P0 1102 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 IL20RAQ9UHF4 553 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 HDGFL3Q9Y3E1 203 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 CORINQ9Y5Q5 1042 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 DCHS1Q96JQ0 3298 aa12.34□□□□□ -0.43
CCDC40-209ENST00000573474 CEP295Q9C0D2 2601 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 LIPT2A6NK58 231 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 GJE1A6NN92 205 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 FTCDNL1E5RQL4 147 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 LINC01387J3KSC0 135 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 HPNP05981 417 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 IMPDH2P12268 514 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 PEPDP12955 493 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 GABRB1P18505 474 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 GRPRP30550 384 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 UQCRC1P31930 480 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 RPL4P36578 427 aaKnown RBP12.33□□□□□ -0.44
CCDC40-209ENST00000573474 AQP2P41181 271 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 TMPRSS3P57727 454 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 CXCR4P61073 352 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 RAC1P63000 192 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 CSNK2BP67870 215 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 EFNB1P98172 346 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 SGCBQ16585 318 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 TMEM176BQ3YBM2 270 aaPredicted RBP12.33□□□□□ -0.44
CCDC40-209ENST00000573474 SLC6A19Q695T7 634 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 LAIR2Q6ISS4 152 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 BORAQ6PGQ7 559 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.33□□□□□ -0.44
CCDC40-209ENST00000573474 SLC22A16Q86VW1 577 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 TCEANCQ8N8B7 351 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 MOSPD2Q8NHP6 518 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 CNIH3Q8TBE1 160 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 GPX7Q96SL4 187 aaPredicted RBP12.33□□□□□ -0.44
CCDC40-209ENST00000573474 TMEM185BQ9H7F4 350 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 ZNF703Q9H7S9 590 aaPredicted RBP12.33□□□□□ -0.44
CCDC40-209ENST00000573474 ZNF696Q9H7X3 374 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 CLN6Q9NWW5 311 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 QPCTLQ9NXS2 382 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 MRPL39Q9NYK5 338 aaKnown RBP12.33□□□□□ -0.44
CCDC40-209ENST00000573474 TRAPPC4Q9Y296 219 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 RAXQ9Y2V3 346 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 SLC6A5Q9Y345 797 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 PCDHGB7Q9Y5F8 929 aa12.33□□□□□ -0.44
CCDC40-209ENST00000573474 FAM166BA8MTA8 275 aa12.32□□□□□ -0.44
CCDC40-209ENST00000573474 MCIDASD6RGH6 385 aa12.32□□□□□ -0.44
CCDC40-209ENST00000573474 M0R129 80 aa12.32□□□□□ -0.44
CCDC40-209ENST00000573474 SURF4O15260 269 aa12.32□□□□□ -0.44
CCDC40-209ENST00000573474 TLX2O43763 284 aaPredicted RBP12.32□□□□□ -0.44
CCDC40-209ENST00000573474 IDH3BO43837 385 aa12.32□□□□□ -0.44
CCDC40-209ENST00000573474 PRKYO43930 277 aa12.32□□□□□ -0.44
CCDC40-209ENST00000573474 FZD7O75084 574 aa12.32□□□□□ -0.44
CCDC40-209ENST00000573474 WBP4O75554 376 aaKnown RBP12.32□□□□□ -0.44
CCDC40-209ENST00000573474 PPP1R3DO95685 299 aa12.32□□□□□ -0.44
CCDC40-209ENST00000573474 OPN1LWP04000 364 aa12.32□□□□□ -0.44
CCDC40-209ENST00000573474 GTF2E2P29084 291 aaKnown RBP12.32□□□□□ -0.44
CCDC40-209ENST00000573474 RFC3P40938 356 aa12.32□□□□□ -0.44
CCDC40-209ENST00000573474 PPIAP62937 165 aaKnown RBP12.32□□□□□ -0.44
CCDC40-209ENST00000573474 FOXK2Q01167 660 aa12.32□□□□□ -0.44
CCDC40-209ENST00000573474 RPL18Q07020 188 aaKnown RBP12.32□□□□□ -0.44
CCDC40-209ENST00000573474 MYBPHQ13203 477 aa12.32□□□□□ -0.44
CCDC40-209ENST00000573474 PMS2P3Q13401 168 aa12.32□□□□□ -0.44
CCDC40-209ENST00000573474 OR7A5Q15622 319 aa12.32□□□□□ -0.44
CCDC40-209ENST00000573474 KCTD21Q4G0X4 260 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms