RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 SPDL1Q96EA4 605 aa8.5□□□□□ -1.05
NPLOC4-212ENST00000573328 EBF4Q9BQW3 602 aa8.5□□□□□ -1.05
NPLOC4-212ENST00000573328 C1QTNF6Q9BXI9 259 aa8.5□□□□□ -1.05
NPLOC4-212ENST00000573328 TRIM2Q9C040 744 aa8.5□□□□□ -1.05
NPLOC4-212ENST00000573328 ADAM19Q9H013 955 aa8.5□□□□□ -1.05
NPLOC4-212ENST00000573328 PAIP1Q9H074 479 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-212ENST00000573328 A4GALTQ9NPC4 353 aa8.5□□□□□ -1.05
NPLOC4-212ENST00000573328 ZNF701Q9NV72 531 aaPredicted RBP8.5□□□□□ -1.05
NPLOC4-212ENST00000573328 MGAT4BQ9UQ53 548 aa8.5□□□□□ -1.05
NPLOC4-212ENST00000573328 CHD3Q12873 2000 aaKnown RBP8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 A0A096LPI6 279 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 LIPT2A6NK58 231 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 AQP7P3A6NL99 342 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 ELOA3DA6NLF2 546 aaPredicted RBP8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 SHISA9B4DS77 424 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 PGM3O95394 542 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 ITGA5P08648 1049 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 DANCRP0C864 163 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 PAX1P15863 534 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 PPIBP23284 216 aaKnown RBP8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 PTAFRP25105 342 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 PCSK6P29122 969 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 NTF4P34130 210 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 IDH3AP50213 366 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 FOXG1P55316 489 aaPredicted RBP8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 H3F3AP84243 136 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 HOXC5Q00444 222 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 IL1RL1Q01638 556 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 SPOCK1Q08629 439 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 ETFDHQ16134 617 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 GABRA6Q16445 453 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 KRTAP21-3Q3LHN1 58 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 ELOA3BQ3SY89 546 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 AGKQ53H12 422 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 TTMPQ5BVD1 217 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 GCNT6Q5T4J0 391 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 TSPO2Q5TGU0 170 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 C1orf140Q5VVS0 124 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 AGAP6Q5VW22 663 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 ABHD12BQ7Z5M8 362 aaPredicted RBP8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 KRT73Q86Y46 540 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 ELOA3Q8NG57 546 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 NFKBIDQ8NI38 313 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 C3orf49Q96BT1 292 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 SLC25A36Q96CQ1 311 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 RADILQ96JH8 1075 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 CCDC28BQ9BUN5 200 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 SPATA5L1Q9BVQ7 753 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 SLCO5A1Q9H2Y9 848 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 SLC7A10Q9NS82 523 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 DCTN4Q9UJW0 460 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 SLC13A4Q9UKG4 626 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 AMDHD2Q9Y303 409 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 SLC25A15Q9Y619 301 aa8.49□□□□□ -1.05
NPLOC4-212ENST00000573328 EVPLLA8MZ36 301 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 RNF223E7ERA6 249 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 ZNF587BE7ETH6 402 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 WNT11O96014 354 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 ARAFP10398 606 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 PTNP21246 168 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 CD40P25942 277 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 MPGP29372 298 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 ACVR1BP36896 505 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 RPS5P46782 204 aaKnown RBP8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 TNK1Q13470 666 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 SQLEQ14534 574 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 PGGHGQ32M88 737 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 REEP3Q6NUK4 255 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 NIPAL3Q6P499 406 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 BLOC1S3Q6QNY0 202 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 FBXL14Q8N1E6 418 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 C17orf78Q8N4C9 275 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 POMGNT2Q8NAT1 580 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 MAPK1IP1LQ8NDC0 245 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 C1orf162Q8NEQ5 155 aaPredicted RBP8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 STK35Q8TDR2 534 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 TMEM45BQ96B21 275 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 THOC1Q96FV9 657 aaKnown RBP8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 ZNF385AQ96PM9 386 aaKnown RBP8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 ALKBH3Q96Q83 286 aaPredicted RBP8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 TRAF4Q9BUZ4 470 aaPredicted RBP8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 SF3B5Q9BWJ5 86 aaKnown RBP8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 INTS9Q9NV88 658 aaKnown RBP8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 ARGLU1Q9NWB6 273 aaPredicted RBP8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 SLC25A37Q9NYZ2 338 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 SELENONQ9NZV5 590 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 CORO2BQ9UQ03 480 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 ATP23Q9Y6H3 246 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 HIVEP2P31629 2446 aa8.48□□□□□ -1.05
NPLOC4-212ENST00000573328 HMGB1P1B2RPK0 211 aaPredicted RBP8.47□□□□□ -1.05
NPLOC4-212ENST00000573328 TMEM229AB2RXF0 380 aa8.47□□□□□ -1.05
NPLOC4-212ENST00000573328 OVOL3O00110 214 aa8.47□□□□□ -1.05
NPLOC4-212ENST00000573328 VAMP5O95183 116 aa8.47□□□□□ -1.05
NPLOC4-212ENST00000573328 IGHV4-39P01824 125 aa8.47□□□□□ -1.05
NPLOC4-212ENST00000573328 TP53P04637 393 aaPredicted RBP8.47□□□□□ -1.05
NPLOC4-212ENST00000573328 BMP2P12643 396 aa8.47□□□□□ -1.05
NPLOC4-212ENST00000573328 ETS2P15036 469 aa8.47□□□□□ -1.05
NPLOC4-212ENST00000573328 SLC6A2P23975 617 aa8.47□□□□□ -1.05
NPLOC4-212ENST00000573328 AQP1P29972 269 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms