RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 RNF115Q9Y4L5 304 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 PRORSD1PA6NEY8 169 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 DPRXA6NFQ7 191 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 FBP2O00757 339 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 NPIPB7O75200 414 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 SERPINB7O75635 380 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 CNOT4O95628 575 aaKnown RBP15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 CBLP22681 906 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 GTF2E2P29084 291 aaKnown RBP15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 BSPH1Q075Z2 132 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 ALG10BQ5I7T1 473 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 TSPO2Q5TGU0 170 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 ADAM5Q6NVV9 412 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 SEZ6L2Q6UXD5 910 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 AAED1Q7RTV5 226 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 KRTAP1-3Q8IUG1 177 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 KDM8Q8N371 416 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 KBTBD8Q8NFY9 601 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 OR10A6Q8NH74 314 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 STK35Q8TDR2 534 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 SLC35B4Q969S0 331 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 USB1Q9BQ65 265 aaKnown RBP15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 TMEM204Q9BSN7 226 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 PTDSS2Q9BVG9 487 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 SLC7A10Q9NS82 523 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 PARPBPQ9NWS1 579 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 TAS2R16Q9NYV7 291 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 SEC14L4Q9UDX3 406 aa15.67■□□□□ 0.1
CTDNEP1-207ENST00000572043 CCDC168Q8NDH2 2452 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 OR5H1A6NKK0 313 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 M0R3H8 397 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 HS3ST1O14792 307 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 MFN2O95140 757 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 ITGA5P08648 1049 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 CDH2P19022 906 aaPredicted RBP15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 HOXC12P31275 282 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 P2RY4P51582 365 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 EGR4Q05215 589 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 MMEL1Q495T6 779 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 Q5PR19 223 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 TIMM23BQ5SRD1 257 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 ZIC4Q8N9L1 334 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 LILRB1Q8NHL6 650 aaPredicted RBP15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 TSPEARQ8WU66 669 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 PIP5K1AQ99755 562 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 C1QTNF6Q9BXI9 259 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 TRIM2Q9C040 744 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 NPAP1Q9NZP6 1156 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 SELENONQ9NZV5 590 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 MALT1Q9UDY8 824 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 PRDM4Q9UKN5 801 aa15.66■□□□□ 0.1
CTDNEP1-207ENST00000572043 M0QX08 132 aa15.65■□□□□ 0.1
CTDNEP1-207ENST00000572043 PNMTP11086 282 aa15.65■□□□□ 0.1
CTDNEP1-207ENST00000572043 ZNF83P51522 516 aa15.65■□□□□ 0.1
CTDNEP1-207ENST00000572043 IL1RL1Q01638 556 aa15.65■□□□□ 0.1
CTDNEP1-207ENST00000572043 LGALS3BPQ08380 585 aa15.65■□□□□ 0.1
CTDNEP1-207ENST00000572043 RBBP4Q09028 425 aa15.65■□□□□ 0.1
CTDNEP1-207ENST00000572043 KLF10Q13118 480 aa15.65■□□□□ 0.1
CTDNEP1-207ENST00000572043 OR1Q1Q15612 314 aa15.65■□□□□ 0.1
CTDNEP1-207ENST00000572043 RABL3Q5HYI8 236 aa15.65■□□□□ 0.1
CTDNEP1-207ENST00000572043 LSMEM1Q8N8F7 131 aa15.65■□□□□ 0.1
CTDNEP1-207ENST00000572043 MFSD8Q8NHS3 518 aa15.65■□□□□ 0.1
CTDNEP1-207ENST00000572043 TMEM45BQ96B21 275 aa15.65■□□□□ 0.1
CTDNEP1-207ENST00000572043 SF3B5Q9BWJ5 86 aaKnown RBP15.65■□□□□ 0.1
CTDNEP1-207ENST00000572043 KAT8Q9H7Z6 458 aaKnown RBP15.65■□□□□ 0.1
CTDNEP1-207ENST00000572043 TMEM27Q9HBJ8 222 aa15.65■□□□□ 0.1
CTDNEP1-207ENST00000572043 SAR1AQ9NR31 198 aa15.65■□□□□ 0.1
CTDNEP1-207ENST00000572043 TESQ9UGI8 421 aaKnown RBP15.65■□□□□ 0.1
CTDNEP1-207ENST00000572043 LAMP3Q9UQV4 416 aa15.65■□□□□ 0.1
CTDNEP1-207ENST00000572043 TACC2O95359 2948 aa15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 IGKV1D-42A0A075B6H8 117 aa15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 LOC100653049A0A140TA62 436 aa15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 FTCDNL1E5RQL4 147 aa15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 TPST2O60704 377 aa15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 ANKRD17O75179 2603 aaKnown RBP15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 KRT33AO76009 404 aa15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 KRT34O76011 436 aa15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 SELENOPP49908 381 aa15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 PCBP3P57721 371 aaKnown RBP15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 GABRA6Q16445 453 aa15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 DUSP7Q16829 419 aa15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 TRMT5Q32P41 509 aaKnown RBP15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 REP15Q6BDI9 236 aa15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 NIPAL3Q6P499 406 aa15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 C6orf89Q6UWU4 347 aa15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 CREB3L2Q70SY1 520 aa15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 RANBP3LQ86VV4 465 aaPredicted RBP15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 SNX32Q86XE0 403 aa15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 ZNF611Q8N823 705 aa15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 GPR32P1Q8NGA4 272 aa15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 VANGL1Q8TAA9 524 aaPredicted RBP15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 TMEM171Q8WVE6 324 aa15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 DNAJA4Q8WW22 397 aaPredicted RBP15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 TAAR8Q969N4 342 aa15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 RASD1Q9Y272 281 aa15.64■□□□□ 0.09
CTDNEP1-207ENST00000572043 PRRC2AP48634 2157 aaKnown RBP15.63■□□□□ 0.09
CTDNEP1-207ENST00000572043 SPG11Q96JI7 2443 aa15.63■□□□□ 0.09
CTDNEP1-207ENST00000572043 M0R082 166 aa15.63■□□□□ 0.09
CTDNEP1-207ENST00000572043 M0R1B8 84 aa15.63■□□□□ 0.09
CTDNEP1-207ENST00000572043 MRASO14807 208 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms